Evaluation method | Criteria | Points |
---|---|---|
Sequence identity for BLAST, RPS-BLAST and HHSearch | 20% to 40% | 1 |
40% to 60% | 2 | |
60% to 80% | 3 | |
80% to 90% | 4 | |
90% to100% | 5 | |
HHsearch probability | 80% to 85% | 1 |
85% to 90% | 2 | |
90% to 99% | 3 | |
99% to 99.99% | 4 | |
99.99% to 100% | 5 | |
BLAST and RPS-BLAST e-value | 1e-6 to 1e-2 | 1 |
1e-6 to 1e-18 | 2 | |
1e-18 to 1e-54 | 3 | |
< 1e-54 | 4 | |
Consensus bonus | Predicted by two methods | 1 |
Predicted by three methods | 2 |