GI clusters r = 0.9, MCL1.7 | Probes | Unique gene IDs | Cluster Expression Profile Description | GI-cluster: Class | GI-cluster: Sub-Class |
---|---|---|---|---|---|
Cluster003 | 460 | 372 | Tongue/lower_esophagus | Stratified squamous epithelium | Epithelium |
Cluster008 | 132 | 114 | Tongue>>lower_esophagus | Stratified squamous epithelium | Epithelium |
Cluster016 | 66 | 52 | Stomach/intestine | Columnar epithelial | Epithelium |
Cluster005 | 328 | 251 | Small intestine | Digestion/absorption | Epithelium |
Cluster028 | 21 | 17 | General-higher in fundus/intestine | Epithelial | Epithelium |
Cluster021 | 35 | 29 | Intestine | Intestinal epithelium | Epithelium |
Cluster013 | 93 | 76 | Salivary gland | Stratified columnar epithelium | Epithelium |
Cluster025 | 23 | 19 | Colon specific | Colon epithelial specific function | Epithelium |
Cluster029 | 21 | 18 | Colon>>fundus | Colon epithelial specific function | Epithelium |
Cluster040 | 16 | 8 | Colon>>fundus/small intestine | Colon epithelial specific function | Epithelium |
Cluster015 | 76 | 65 | Salivary gland | Mucous acini | Glandular epithelium |
Cluster006 | 167 | 135 | Salivary gland | Serous acini | Glandular epithelium |
Cluster023 | 26 | 19 | Fundus | Fundic glands | Glandular epithelium |
Cluster012 | 106 | 89 | Fundus>antrum | Mucous neck/gastric glands | Glandular epithelium |
Cluster018 | 61 | 51 | Antrum | Pyloric glands | Glandular epithelium |
Cluster031 | 20 | 17 | Duodenum>fundus>intestine | Complement (crypts/goblet cells) | Glandular epithelium |
Cluster014 | 79 | 60 | Duodenum | Glandular/epithelial | Glandular epithelium |
Cluster001 | 801 | 653 | Ileum>jejunum | B cell/cell cycle | Immune |
Cluster039 | 17 | 12 | Intestine/stomach/salivary | Plasma B cell | Immune |
Cluster020 | 37 | 30 | High in intestine (small>large)/fundus | T cell | Immune |
Cluster055 | 11 | 6 | High in intestine (small>large)/fundus | T cell | Immune |
Cluster027 | 22 | 16 | Stomach/intestine-variable between animals | IFN response | Immune |
Cluster033 | 18 | 15 | Stomach/intestine-variable between animals | Immune response | Immune |
Cluster037 | 17 | 15 | General-higher in stomach/intestine | Immune-related | Immune |
Cluster011 | 122 | 91 | General-higher in stomach/intestine | MHC class 1 antigen presentation | Immune |
Cluster022 | 32 | 30 | General-higher in intestine/stomach | MHC class 2 antigen presentation (immune) | Immune |
Cluster026 | 23 | 21 | Pylorus | Neuronal | Neuronal |
Cluster010 | 124 | 95 | General-higher in pylorus>antrum | Neuronal | Neuronal |
Cluster004 | 456 | 336 | Tongue/upper oesophagus | Skeletal muscle | Muscle |
Cluster002 | 532 | 382 | Pylorus/antrum/oesophagus>>general | Smooth muscle/ECM (Fibroblast) | Muscle |
Cluster052 | 12 | 9 | Esophagus | Cartilage | Muscle |
Cluster030 | 20 | 17 | Tongue/esophagus>pylorus | Muscle-related | Muscle |
Cluster009 | 130 | 93 | General-higher in tongue/u-esophagus/antrum/pylorus | Muscle-smooth/skeletal | Muscle |
Cluster007 | 149 | 142 | General-higher in ileum, rectum | Cell cycle-related | Pathway |
Cluster019 | 58 | 54 | General-higher in small intestine | Histones | Pathway |
Cluster017 | 63 | 53 | General-higher in muscle | Oxidative phosphorylation | Pathway |