Skip to main content

Table 2 Genes losing multiple introns

From: Frequency of intron loss correlates with processed pseudogene abundance: a novel strategy to test the reverse transcriptase model of intron loss

Ensembl gene ID

Species

Positiona

Type of loss

Gene symbol

ENSMUSG00000048222

mouse

3,971

adjacent loss

Mfap1b

ENSMUSG00000048222

mouse

4,101

adjacent loss

Mfap1b

ENSMUSG00000072910

mouse

209

adjacent loss

Gm16381

ENSMUSG00000072910

mouse

293

adjacent loss

Gm16381

ENSMUSG00000072910

mouse

331

adjacent loss

Gm16381

ENSRNOG00000002935

rat

134

adjacent loss

Ankrd40

ENSRNOG00000002935

rat

283

adjacent loss

Ankrd40

ENSRNOG00000005260

rat

14,955

adjacent loss

Acp1

ENSRNOG00000005260

rat

15,061

adjacent loss

Acp1

ENSRNOG00000010458

rat

355

adjacent loss

F1M6Y0_RAT

ENSRNOG00000010458

rat

564

adjacent loss

F1M6Y0_RAT

ENSRNOG00000010458

rat

1,116

solitary loss

F1M6Y0_RAT

ENSRNOG00000010989

rat

26,396

solitary loss

Ipo5

ENSRNOG00000010989

rat

29,302

solitary loss

Ipo5

ENSRNOG00000014048

rat

25,880

adjacent loss

CYLD_RAT

ENSRNOG00000014048

rat

26,022

adjacent loss

CYLD_RAT

ENSRNOG00000014048

rat

26,145

adjacent loss

CYLD_RAT

ENSRNOG00000014048

rat

26,237

adjacent loss

CYLD_RAT

ENSRNOG00000014048

rat

26,304

adjacent loss

CYLD_RAT

ENSRNOG00000014048

rat

26,437

adjacent loss

CYLD_RAT

ENSRNOG00000014048

rat

26,546

adjacent loss

CYLD_RAT

ENSRNOG00000020266

rat

2,756

solitary loss

Eef2

ENSRNOG00000020266

rat

3,814

solitary loss

Eef2

ENSRNOG00000020266

rat

4,435

solitary loss

Eef2

ENSRNOG00000025637

rat

444

adjacent loss

LOC317471

ENSRNOG00000025637

rat

647

adjacent loss

LOC317471

ENSRNOG00000026046

rat

3,972

adjacent loss

Apex2

ENSRNOG00000026046

rat

4,237

adjacent loss

Apex2

ENSRNOG00000026046

rat

4,384

adjacent loss

Apex2

ENSRNOG00000026046

rat

4,454

adjacent loss

Apex2

ENSRNOG00000034071

rat

190

adjacent loss

Chmp4bl1

ENSRNOG00000034071

rat

368

adjacent loss

Chmp4bl1

ENSRNOG00000034071

rat

483

adjacent loss

Chmp4bl1

ENSRNOG00000034071

rat

610

adjacent loss

Chmp4bl1

ENSRNOG00000043377

rat

7,246

adjacent loss

Fdps

ENSRNOG00000043377

rat

7,369

adjacent loss

Fdps

  1. aThe positions of the lost introns in gene sequences, for example, the first row of data represents an intron lost between the 3,971th nucleotide and the 3,972th nucleotide of the Mfap1b gene.