Table 3 DE genes across pairs of individuals and overlap with top 10% most variable genes at 0Â hours
From: RNA-seq: impact of RNA degradation on transcript quantification
|  | GLM individual | GLM, individual + RIN | Regress RIN, GLM individual | |||
|---|---|---|---|---|---|---|
Test | Number DE genes | % overlap | Number DE genes | % overlap | Number DE genes | % overlap |
Ind 1 vs Ind 3 | 69 | 86.96% | 553 | 45.39% | 268 | 75.00% |
Ind 1 vs Ind 4 | 48 | 89.58% | 401 | 50.12% | 190 | 78.95% |
Ind 3 vs Ind 4 | 100 | 87.00% | 573 | 49.21% | 299 | 73.91% |
All individuals | 160 | 85.00% | 1053 | 42.64% | 521 | 71.98% |