Table 2 Log-likelihood differences based on totalml analysis
From: Basal jawed vertebrate phylogeny inferred from multiple nuclear DNA-coded genes
| Â | Â | Inference from each protein | Â | P-values | Â | Â | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Topology |  | ALDa | ALDb | ALDc | G6PD | GAG | PGK | TPI | Δ ln L i ± σ i | KH | AU | BPP | BP |
b ((((tp,(((tl,(ga,bo)),st),bi)),lu),ca),out) | (A, A) | 0.2 | 1.6 | 1.3 | 1.0 | 1.0 | 1.6 | 1.0 | ML | 0.67 | 0.93 | 0.99 | 0.45 |
a ((((tp,lu),(((tl,(ga,bo)),st),bi)),ca),out) | (A, A) | 1.0 | 1.4 | 1.3 | 0.7 | 0.5 | 1.7 | 1.1 | 5.30 ± 12.2 | 0.33 | 0.76 | 0.01 | 0.23 |
c (((tp,(lu,(((tl,(ga,bo)),st),bi))),ca),out) | (A, A) | 1.0 | 1.7 | 1.3 | 0.6 | 1.2 | 1.7 | 1.2 | 13.5 ± 11.0 | 0.11 | 0.28 | 0.00 | 0.03 |
f ((((tp,((((tl,bo),ga),st),bi)),lu),ca),out) | (A, B) | 0.2 | 2.0 | 1.2 | 1.3 | 1.1 | 1.7 | 1.0 | 15.3 ± 12.7 | 0.12 | 0.24 | 0.00 | 0.05 |
j ((((tp,((((tl,ga),bo),st),bi)),lu),ca),out) | (A, C) | 0.4 | 1.8 | 1.3 | 1.6 | 1.1 | 1.7 | 0.8 | 17.1 ± 12.3 | 0.08 | 0.21 | 0.00 | 0.04 |
i ((((tp,(((tl,(ga,bo)),st),bi)),ca),lu),out) | (-, A) | 0.6 | 2.2 | 1.4 | 1.1 | 1.3 | 1.7 | 1.2 | 19.9 ± 13.1 | 0.07 | 0.20 | 0.00 | 0.03 |
d ((((tp,lu),((((tl,bo),ga),st),bi)),ca),out) | (A, B) | 0.8 | 1.7 | 1.2 | 1.1 | 0.6 | 1.8 | 1.0 | 20.2 ± 17.6 | 0.12 | 0.29 | 0.00 | 0.03 |
m ((((tp,lu),((((tl,ga),bo),st),bi)),ca),out) | (A, C) | 1.1 | 1.6 | 1.3 | 1.4 | 0.6 | 1.8 | 0.9 | 21.8 ± 16.9 | 0.10 | 0.20 | 0.00 | 0.02 |
e ((((tp,lu),ca),(((tl,(ga,bo)),st),bi)),out) | (-, A) | 1.4 | 1.7 | 1.3 | 0.6 | 0.0 | 1.9 | 1.6 | 26.7 ± 19.1 | 0.08 | 0.23 | 0.00 | 0.01 |
g (((tp,((((tl,(ga,bo)),st),bi),ca)),lu),out) | (-, A) | 1.4 | 2.2 | 1.2 | 0.9 | 1.1 | 1.6 | 1.0 | 27.1 ± 18.3 | 0.07 | 0.31 | 0.00 | 0.02 |
n (((tp,(lu,((((tl,ga),bo),st),bi))),ca),out) | (A, C) | 1.1 | 1.9 | 1.3 | 1.4 | 1.3 | 1.8 | 1.1 | 30.4 ± 16.0 | 0.06 | 0.12 | 0.00 | 0.01 |