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Table 3 PEP-CTERM domain abundance in environmental metagenome datasets

From: Exopolysaccharide-associated protein sorting in environmental organisms: the PEP-CTERM/EpsH system. Application of a novel phylogenetic profiling heuristic

ID Environmental source Size (MB) # PEP-CTERM Relative abundancea
13694 Sargasso sea: planktonic (filtered) marine 670 2 0.01
13696 Iron Mountain, CA: acid mine drainage biofilm 10 1 0.4
  Yellowstone hot spring microbial mats 168 150 4
13700 Whale Fall Community: microbial mat & rib bone 9 18 8
13699 Waseca County, MN: clay loam surface farm soil 12 84 29
  1. a Data was normalized to results from the Comprehensive Microbial Resource which showed 256 hits from a database size of 1048 MB of DNA.