Table 3 Summary of I-TASSER modeling on the Benchmark III
From: Ab initio modeling of small proteins by iterative TASSER simulations
|  |  |  | Cα-RMSD (Å) (TM-score) of I-TASSER models | |
|---|---|---|---|---|
Protein name | Length (residues) | Secondary structure | First cluster | Best in top five clusters |
1ne3A | 56 | β | 4.6 (0.45) | 4.6 (0.48) |
2cr7A | 60 | α | 4.5 (0.48) | 2.6 (0.66) |
2f3nA | 65 | α | 1.8 (0.74) | 1.8 (0.74) |
1itpA | 68 | αβ | 10.9 (0.33) | 4.5 (0.40) |
1kviA | 68 | αβ | 2.0 (0.72) | 2.0 (0.72) |
1b4bA | 71 | αβ | 6.4 (0.48) | 5.6 (0.54) |
1gjxA | 77 | β | 6.9 (0.44) | 5.6 (0.47) |
1of9A | 77 | α | 3.6 (0.53) | 3.6 (0.53) |
1mn8A | 84 | α | 7.0 (0.35) | 7.0 (0.35) |
1fo5A | 85 | αβ | 3.8 (0.54) | 3.8 (0.54) |
1ten_ | 87 | β | 1.6 (0.85) | 1.6 (0.85) |
1fadA | 92 | α | 3.6 (0.59) | 3.6 (0.59) |
1no5A | 93 | αβ | 10.6 (0.43) | 10.5 (0.45) |
1g1cA | 98 | β | 2.5 (0.79) | 2.5 (0.79) |
1cqkA | 101 | β | 1.5 (0.88) | 1.5 (0.88) |
1abv_ | 103 | α | 13.0 (0.28) | 6.8 (0.40) |
1jnuA | 104 | αβ | 2.7 (0.75) | 2.7 (0.75) |
1egxA | 115 | αβ | 2.3 (0.80) | 2.3 (0.83) |
1gyvA | 117 | β | 3.3 (0.78) | 3.3 (0.78) |
1orgA | 118 | α | 2.4(0.78) | 2.4(0.78) |
Average | 87 | Â | 4.8 (0.60) | 3.9 (0.63) |