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Table 4 Oligonucleotide primers used in the N. gonorrhoeae MLST scheme

From: Species status of Neisseria gonorrhoeae: evolutionary and epidemiological inferences from multilocus sequence typing

Locus

Name

Sequence (5'-3')

Function

abcZ

abcZ-P1

AATCGTTTATGTACCGCAGG

Amplification and sequencing

abcZ

abcZ-S2

GAGAACGAGCCGGGATAGGA

Amplification and sequencing

adk

adk-P1

ATGGCAGTTTGTGCAGTTGG

Amplification

adk

adk-P2

GATTTAAACAGCGATTGCCC

Amplification

adk

adk-S1

AGGCTGGCACGCCCTTGG

Sequencing

adk

adk-S2

CAATACTTCGGCTTTCACGG

Sequencing

aroE

aroE-P1

ACGCATTTGCGCCGACATC

Amplification and sequencing

aroE

aroE-P2

ATCAGGGCTTTTTTCAGGTT

Amplification

aroE

aroE-S2

ATGATGTTGCCGTACACATA

Sequencing

fumC

fumC-P1

CACCGAACACGACACGATGG

Amplification

fumC

fumC-P2

ACGACCAGTTCGTCAAACTC

Amplification

fumC

fumC-S1

TCCGGCTTGCCGTTTGTCAG

Sequencing

fumC

fumC-S2

TTGTAGGCGGTTTTGGCGAC

Sequencing

gdh

gdh-P1

ATCAATACCGATGTGGCGCGT

Amplification

gdh

gdh-P2

GGTTTTCATCTGCGTATAGAG

Amplification and sequencing

gdh

gdh-S3

CCTTGGCAAAGAAAGCCTGC

Sequencing

pdhC

pdhC-P1

GGTTTCCAACGTATCGGCGAC

Amplification

pdhC

pdhC-P2

ATCGGCTTTGATGCCGTATTT

Amplification and sequencing

pdhC

pdhC-S1

TCTACTACATCACCCTGATG

Sequencing

pgm

pgm-S1

CGGCGATGCCGACCGCTTGG

Amplification and sequencing

pgm

pgm-S2

GGTGATGATTTCGGTTGCGCC

Amplification and sequencing

  1. Oligonucleotide primers were as previously published [16,25].