Figure 2
From: Visualizing regulatory interactions in metabolic networks
Different ways to represent pool size and flux data in the context of a metabolic network. (a) Network nodes and edges of a hypergraph are annotated with textual tags. (b) Direct representation of metabolite data in a hypergraph using bar plots. (c) Mapping of pool sizes and flux quantities to the shape and size of the network nodes using a bipartite graph. Metabolite concentrations are represented as boxes filled depending on their pool size. Fluxes are represented by varying arrow widths. (d) Visualization of time-dependent data in a bipartite graph using time course plots.