Table 3 Human PRD class homeobox genes and pseudogenes
From: Classification and nomenclature of all human homeobox genes
Human PRD-class homeobox genes and pseudogenes | |||||
|---|---|---|---|---|---|
Family | Gene symbol | Gene name | Location | Entrez gene IDc | Previous symbols |
Alx | ALX1 | ALX homeobox 1 | 12q21.31 | 8092 | CART1 |
| Â | ALX3 | ALX homeobox 3 | 1p13.3 | 257 | Â |
| Â | ALX4 | ALX homeobox 4 | 11p11.2 | 6059 | Â |
Argfx | ARGFX | arginine-fifty homeobox | 3q13.33 | 503582 | Â |
| Â | ARGFXP1 | arginine-fifty homeobox pseudogene 1 | 5q23.2 | 503583 | Â |
| Â | ARGFXP2 | arginine-fifty homeobox pseudogene 2 | 17q11.2 | 503640 | Â |
Arx | ARX | aristaless related homeobox | Xp21.3 | 170302 | ISSX |
Dmbx | DMBX1 | diencephalon/mesencephalon brain homeobox 1 | 1p34.1 | 127343 | MBX, OTX3, PAXB |
Dprx | DPRX | divergent paired-related homeobox | 19q13.42 | 503834 | Â |
| Â | DPRXP1 | divergent paired-related homeobox pseudogene 1 | 2q32.1 | 503641 | Â |
| Â | DPRXP2 | divergent paired-related homeobox pseudogene 2 | 6p21.31 | 503643 | Â |
| Â | DPRXP3 | divergent paired-related homeobox pseudogene 3 | 14q13.2 | 503644 | Â |
| Â | DPRXP4 | divergent paired-related homeobox pseudogene 4 | 17q11.2 | 503645 | Â |
| Â | DPRXP5 | divergent paired-related homeobox pseudogene 5 | 21q22.13 | 503646 | Â |
| Â | DPRXP6 | divergent paired-related homeobox pseudogene 6 | Xp11.4 | 503647 | Â |
| Â | DPRXP7 | divergent paired-related homeobox pseudogene 7 | Xq23 | 503648 | Â |
Drgx | DRGX | dorsal root ganglia homeobox | 10q11.23 | 644168 | DRG11, PRRXL1 |
Dux | DUXA | double homeobox A | 19q13.43 | 503835 | Â |
| Â | DUXAP1 | double homeobox A pseudogene 1 | 2p11.2 | 503630 | Â |
| Â | DUXAP2 | double homeobox A pseudogene 2 | 8q22.3 | 503631 | Â |
| Â | DUXAP3 | double homeobox A pseudogene 3 | 10q11.21 | 503632 | Â |
| Â | DUXAP4 | double homeobox A pseudogene 4 | 10q11.21 | 503633 | Â |
| Â | DUXAP5 | double homeobox A pseudogene 5 | 11q23.3 | 503634 | Â |
| Â | DUXAP6 | double homeobox A pseudogene 6 | 15q26.1 | 503635 | Â |
| Â | DUXAP7 | double homeobox A pseudogene 7 | 20p11.23 | 503636 | Â |
| Â | DUXAP8 | double homeobox A pseudogene 8 | 22q11.21 | 503637 | Â |
| Â | DUXAP9 | double homeobox A pseudogene 9 | 14qcen | 503638 | Â |
| Â | DUXAP10 | double homeobox A pseudogene 10 | 14q11.2 | 503639 | Â |
| Â | DUXB | double homeobox B | 16q23.1 | 100033411 | Â |
Esx | ESX1 | ESX homeobox 1 | Xq22.2 | 80712 | ESX1L, ESXR1 |
Gsc | GSC | goosecoid homeobox | 14q32.13 | 145258 | GSC1 |
| Â | GSC2 | goosecoid homeobox 2 | 22q11.21 | 2928 | GSCL |
Hesx | HESX1 | HESX homeobox 1 | 3p14.3 | 8820 | RPX, ANF |
Hopx | HOPX | HOP homeobox | 4q12 | 84525 | HOP, OB1, LAGY, NECC1, SMAP31 |
Isx | ISX | intestine specific homeobox | 22q12.3 | 91464 | RAXLX |
Leutx | LEUTX | Leucine twenty homeobox | 19q13.2 | 342900 | Â |
Mix | MIXL | Mix paired-like homeobox | 1q42.12 | 83881 | MIX, MIXL1, MILD1 |
Nobox | NOBOX | NOBOX oogenesis homeobox | 7q35 | 135935 | OG2, OG2X |
Otp | OTP | orthopedia homeobox | 5q14.1 | 23440 | Â |
Otx | OTX1 | orthodenticle homeobox 1 | 2p15 | 5013 | Â |
| Â | OTX2 | orthodenticle homeobox 2 | 14q22.3 | 5015 | Â |
| Â | OTX2P1 | orthodenticle homeobox 2 pseudogene | 9q21.2 | 100033409 | OTX2P |
| Â | CRX | cone-rod homeobox | 19q13.32 | 1406 | OTX3 |
Pax2/5/8 | PAX2 | paired box 2 | 10q24.31 | 5076 | Â |
| Â | PAX5 | paired box 5 | 9p13.2 | 5079 | BSAP |
| Â | PAX8 | paired box 8 | 2q13 | 7849 | Â |
Pax3/7 | PAX3 | paired box 3 | 2q36.1 | 5077 | HUP2 |
| Â | PAX7 | paired box 7 | 1p36.13 | 5081 | HUP1, PAX7B |
Pax4/6 | PAX4 | paired box 4 | 7q32.1 | 5078 | Â |
| Â | PAX6 | paired box 6 | 11p13 | 5080 | Â |
Phox | PHOX2A | paired-like homeobox 2a | 11q13.4 | 401 | PMX2A, ARIX |
| Â | PHOX2B | paired-like homeobox 2b | 4p13 | 8929 | PMX2B, NBPhox |
Pitx | PITX1 | pituitary homeobox 1 | 5q31.1 | 5307 | PTX1, POTX, BFT |
| Â | PITX2 | pituitary homeobox 2 | 4q25 | 5308 | PTX2, ARP1, RGS, RIEG, RIEG1 |
| Â | PITX3 | pituitary homeobox 3 | 10q24.32 | 5309 | PTX3 |
Prop | PROP1 | PROP paired-like homeobox 1 | 5q35.3 | 5626 | Â |
Prrx | PRRX1 | paired related homeobox 1 | 1q24.3 | 5396 | PRX1, PMX1, PHOX1 |
| Â | PRRX2 | paired related homeobox 2 | 9q34.11 | 51450 | PRX2, PMX2 |
Rax | RAX | retina and anterior neural fold homeobox | 18q21.31 | 30062 | RX |
| Â | RAX2 | retina and anterior neural fold homeobox 2 | 19p13.3 | 84839 | QRX, RAXL1 |
Rhox | RHOXF1 | Rhox homeobox family, member 1 | Xq24 | 158800 | PEPP1, OTEX |
| Â | RHOXF2 | Rhox homeobox family, member 2 | Xq24 | 84528 | PEPP2 |
| Â | RHOXF2B | Rhox homeobox family, member 2B | Xq24 | 727940 | PEPP2L |
Sebox | SEBOX | SEBOX homeobox | 17q11.2 | 645832 | OG9, OG9X |
Shox | SHOX | short stature homeobox | Xp22.33/ Yp11.32 | 6473 | SHOXY, GCFX, PHOG |
| Â | SHOX2 | short stature homeobox 2 | 3q25.32 | 6474 | SHOT, OG12, OG12X |
Tprx | TPRX1 | tetra-peptide repeat homeobox 1 | 19q13.32 | 284355 | Â |
| Â | TPRX2P | tetra-peptide repeat homeobox 2 pseudogene | 19q13.32 | 503627 | Â |
| Â | TPRX1P1 | tetra-peptide repeat homeobox 1 pseudogene 1 | 10q22.3 | 503628 | Â |
| Â | TPRX1P2 | tetra-peptide repeat homeobox 1 pseudogene 2 | 10q22.3 | 503629 | Â |
| Â | TPRXL | tetra-peptide repeat homeobox-like | 3p25.1 | 348825 | Â |
Uncx | UNCX | UNC homeobox | 7p22.3 | 340260 | PHD1, UNCX4.1 |
Vsx | VSX1 | visual system homeobox 1 | 20p11.21 | 30813 | KTCN, RINX |
| Â | VSX2 | visual system homeobox 2 | 14q24.3 | 338917 | RET1, HOX10, CHX10 |