Skip to main content

Table 2 Accession numbers of genes used for phylogenetic analyses

From: Double-stranded RNA-activated protein kinase PKR of fishes and amphibians: Varying the number of double-stranded RNA binding domains and lineage-specific duplications

Species (common name) Gene Accession number
Bos taurus (cattle) PKR AB104655
Canis familiaris (dog) PKR NM_001048135
Carassius auratus (goldfish) PKZ AY293929
Chlorocebus aethiops (African green monkey) PKR AY623897
Danio rerio (zebrafish) PKR AM421526
Danio rerio (zebrafish) PKZ AJ852018
Danio rerio (zebrafish) PERK XM_695386
Equus caballus (horse) PKR AY850106
Gallus gallus (chicken) PKR AB125660
Gasterosteus aculeatus (three spined stickleback) PKR1 AM850085
Homo sapiens (human) PKR NM_002759
Homo sapiens (human) PERK AF193339
Macaca mulatta (Rhesus macaque) PKR EF467667*
Mesocricetus auratus (golden hamster) PKR DQ645944
Monodelphis domestica (gray short-tailed opossum) PKR ENSMODT00000030492**
Mus musculus (house mouse) PKR NM_011163
Ornithorhynchus anatinus (platypus) PKR ENSOANT00000006231**
Oryctolagus cuniculus (European rabbit) PKR DQ115394
Oryzias latipes (Japanese medaka) PKR AM850088
Pan troglodytes (chimpanzee) PKR XM_001166391
Pimephales promelas (fathead minnow) PKR AM850089
Rattus norvegicus (Norway rat) PKR NM_019335
Salmo salar (Atlantic salmon) PKZ ABA64562
Sus scrofa (pig) PKR NM_214319
Takifugu rubripes (torafugu) PKR1 AM850086
Takifugu rubripes (torafugu) PKR2 AM850087
Tetraodon nigroviridis (green spotted pufferfish) PKR1 AM421523
Tetraodon nigroviridis (green spotted pufferfish) PKR2 AM421524
Tetraodon nigroviridis (green spotted pufferfish) PKR3 AM421525
Xenopus laevis (African clawed frog) PKR1 AM421528
Xenopus tropicalis (western clawed frog) PKR1 AM850090
Xenopus tropicalis (western clawed frog) PKR2 AM850091
Xenopus tropicalis (western clawed frog) PKR3 AM850092
  1. * For phylogenetic analyses a Macaca mulatta PKR sequence was used that is identical to the deduced amino acid sequence EF467667, except for an Asn to Arg substitution at position 384.
  2. ** Ensembl identification numbers are shown.