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Table 2 Accession numbers of genes used for phylogenetic analyses

From: Double-stranded RNA-activated protein kinase PKR of fishes and amphibians: Varying the number of double-stranded RNA binding domains and lineage-specific duplications

Species (common name)

Gene

Accession number

Bos taurus (cattle)

PKR

AB104655

Canis familiaris (dog)

PKR

NM_001048135

Carassius auratus (goldfish)

PKZ

AY293929

Chlorocebus aethiops (African green monkey)

PKR

AY623897

Danio rerio (zebrafish)

PKR

AM421526

Danio rerio (zebrafish)

PKZ

AJ852018

Danio rerio (zebrafish)

PERK

XM_695386

Equus caballus (horse)

PKR

AY850106

Gallus gallus (chicken)

PKR

AB125660

Gasterosteus aculeatus (three spined stickleback)

PKR1

AM850085

Homo sapiens (human)

PKR

NM_002759

Homo sapiens (human)

PERK

AF193339

Macaca mulatta (Rhesus macaque)

PKR

EF467667*

Mesocricetus auratus (golden hamster)

PKR

DQ645944

Monodelphis domestica (gray short-tailed opossum)

PKR

ENSMODT00000030492**

Mus musculus (house mouse)

PKR

NM_011163

Ornithorhynchus anatinus (platypus)

PKR

ENSOANT00000006231**

Oryctolagus cuniculus (European rabbit)

PKR

DQ115394

Oryzias latipes (Japanese medaka)

PKR

AM850088

Pan troglodytes (chimpanzee)

PKR

XM_001166391

Pimephales promelas (fathead minnow)

PKR

AM850089

Rattus norvegicus (Norway rat)

PKR

NM_019335

Salmo salar (Atlantic salmon)

PKZ

ABA64562

Sus scrofa (pig)

PKR

NM_214319

Takifugu rubripes (torafugu)

PKR1

AM850086

Takifugu rubripes (torafugu)

PKR2

AM850087

Tetraodon nigroviridis (green spotted pufferfish)

PKR1

AM421523

Tetraodon nigroviridis (green spotted pufferfish)

PKR2

AM421524

Tetraodon nigroviridis (green spotted pufferfish)

PKR3

AM421525

Xenopus laevis (African clawed frog)

PKR1

AM421528

Xenopus tropicalis (western clawed frog)

PKR1

AM850090

Xenopus tropicalis (western clawed frog)

PKR2

AM850091

Xenopus tropicalis (western clawed frog)

PKR3

AM850092

  1. * For phylogenetic analyses a Macaca mulatta PKR sequence was used that is identical to the deduced amino acid sequence EF467667, except for an Asn to Arg substitution at position 384.
  2. ** Ensembl identification numbers are shown.