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Table 1 Summary of gapped-expressed sequence tag matches and putative novel structures

From: Transcriptome analysis for Caenorhabditis elegansbased on novel expressed sequence tags

% Cov Gap size Chromosome First alignment block Second alignment block Putative novel structure
98 480 I 390514 to 390558 391038 to 391059 Skipped exon
96 489 I 5761023 to 5761058 5761547 to 5761592 Novel end exon confirmed*
98 101 I 7642453 to 7642487 7642588 to 7642631 Novel end exon
98 62 I 9724862 to 9724908 9724970 to 9725025 Alternate exon-intron boundary
98 157 I 11931105 to 11931163 11931320 to 11931345 Novel internal exon
92 45 II 2782924 to 2782962 2783007 to 2783086 Novel end exon confirmed*
98 224 II 10828328 to 10828404 10828628 to 10828667 Confirmed intron*
91 461 II 13635576 to 13635653 13636114 to 13636163 Confirmed intron*
98 548 II 14747166 to 14747225 14747773 to 14747821 Novel end exon
98 306 III 8552492 to 8552538 8552844 to 8552868 Alternate exon-intron boundary
92 277 III 11751557 to 11751606 11751883 to 11751921 Novel end exons confirmed*
92 1364 III 12639534 to 12639558 12640922 to 12640967 Novel internal exon
98 926 IV 9350535 to 9350565 9351491 to 9351529 Confirmed intron*
97 900 V 1981345 to 1981373 1982273 to 1982364 Novel end exons
98 50 X 11824129 to 11824180 11824230 to 11824259 Novel transcript/novel end exons
  1. * A recent WormBase release (WS180) has since confirmed these exon-intron boundaries; the original mapping analysis was performed using WB160.