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Table 5 Significantly changed retrovirus-like genes

From: Microarray and cDNA sequence analysis of transcription during nerve-dependent limb regeneration

Contig Best hit Gene Name NR5 DL5 NR14 DL14 C
10177_Contig1 XP_001201693 rev. transcriptase-like 10 2 0 0 0
10435_Contig1 ABB52637 envelope polyprotein 19 7 0 2 0
10953_Contig8 NP_055405 end. retroviral w 5 15 0 1 0
109875_Contig1 AAD19348 rev. transcriptase-like 0 0 10 0 0
110157_Contig5 NP_079357 hyp. prot. LOC57523 7 20 42 6 0
126954_Contig17 AAM34208 polyprotein 12 22 32 6 8
12813_Contig1 NP_003409 zinc finger protein 9 14 37 67 20 37
154450_Contig16 XP_945963 retrotransposon-like 1 5 27 11 2 10
174946_Contig1 BAC82626 pol-like protein 0 0 11 0 0
185474_Contig140 XP_790598 Helitron transposon 81 276 314 106 59
195627_Contig1 XP_692835 gypsy 1 polyprot. 0 0 11 0 0
218328_Contig1 XP_945963 retrotransposon-like 1 0 0 13 0 0
2194_Contig1 XP_001345076 pol polyprotein 17 0 0 0 0
23276_Contig1 NP_006798 chromobox hom. 1 14 0 0 0 0
23893_Contig1 ZP_01758189 NBB2750 hyp. protein 12 0 0 0 0
32735_Contig1 XP_001201693 rev. transcriptase-like 12 0 0 0 0
331680_Contig1 XP_001336840 lambda-recomb.-like 2 12 30 11 6
352970_Contig1 AAD02928 rev. transcriptase 0 0 0 0 12
39722_Contig1 XP_687309 rev. transcriptase 98 117 138 51 92
42238_Contig456 NP_055883 paternally exp. 10 41 2 10 3 12
42238_Contig60 NP_055883 paternally exp. 10 7 35 37 10 27
89909_Contig1 BAD72127 rev. transcriptase 0 12 0 0 0
94735_Contig1 XP_001336840 lambda-recomb.-like 0 12 0 0 0
  1. Genes identified as differentially expressed by 454 sequencing analysis that have high sequence similarity to retrovirus genes.