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Table 6 Significantly changed wound-healing genes

From: Microarray and cDNA sequence analysis of transcription during nerve-dependent limb regeneration

Probe ID

Best Hit

Symbol

NR5/C

DL5/C

NR14/C

DL14/C

Function

SRV_01351_at

NP_002220

JUNB

4.60

4.74

2.35

3.46

stress resp.

SRV_10702_at

NP_000388

CYBB

2.84

4.11

1.73

2.46

stress resp.

SRV_00330_at

NP_000388

CYBB

2.39

3.46

1.58

2.23

stress resp.

SRV_03054_at

NP_006761

MARCO

2.00

3.11

1.83

3.01

stress resp.

SRV_00130_a_at

NP_000032

APOE

1.90

2.49

2.36

4.28

stress resp.

SRV_00442_at

NP_000569

SLC11A1

1.95

2.76

1.58

3.00

stress resp.

SRV_01821_at

NP_937758

TYROBP

1.98

2.45

 

2.65

stress resp.

SRV_03023_a_at

NP_006696

GADD45G

1.96

2.29

 

2.01

stress resp.

SRV_02588_a_at

NP_005558

LGALS3BP

1.91

2.37

 

1.59

stress resp.

SRV_01177_a_at

NP_001091645

ENTPD1

2.39

2.23

 

1.58

stress resp.

SRV_02586_at

NP_005558

LGALS3BP

1.79

2.25

 

1.81

stress resp.

SRV_11767_a_at

NP_001020466

IFITM5

1.75

1.63

1.56

 

stress resp.

SRV_02724_at

NP_005902

MAT2A

2.60

1.60

1.78

 

stress resp.

SRV_01617_a_at

NP_002843

PTX3

4.30

3.78

  

stress resp.

SRV_02002_at

NP_001020366

CES1

2.36

3.01

  

stress resp.

SRV_03221_a_at

NP_060049

DMBT1

1.81

2.50

  

stress resp.

SRV_07036_at

NP_000567

IL1B

1.70

1.53

  

stress resp.

SRV_02516_at

NP_005338

HSPA5

1.65

   

stress resp.

SRV_02965_at

NP_006519

TFPI2

2.22

   

stress resp.

SRV_12417_at

NP_006087

NDRG1

2.57

   

stress resp.

AH_at

NP_006588

HSPA8

1.52

 

1.67

 

stress resp.

SRV_01846_at

NP_003352

UMOD

2.27

 

2.00

 

stress resp.

SRV_01294_at

NP_002023

FTH1

 

1.67

 

2.01

stress resp.

SRV_01385_at

NP_002293

LECT2

 

3.93

 

7.38

stress resp.

SRV_01840_at

NP_003346

UCP2

 

1.53

 

2.13

stress resp.

SRV_11406_at

NP_002341

LYN

 

1.74

 

1.72

stress resp.

SRV_11583_at

NP_002960

MAPK12

 

2.04

 

1.92

stress resp.

SRV_07726_a_at

NP_001034485

MPEG1

 

1.77

 

2.27

stress resp.

SRV_04367_a_at

NP_064455

IGLL1

   

2.29

stress resp.

SRV_04710_at

NP_078884

NEIL1

   

1.93

stress resp.

SRV_10936_at

NP_000945

PTGDS

   

4.19

stress resp.

SRV_00002_s_at

NP_064455

IGLL1

   

2.09

stress resp.

SRV_00078_at

NP_064455

IGLL1

   

2.43

stress resp.

SRV_01199_a_at

NP_001822

CLU

   

2.36

stress resp.

SRV_02442_a_at

NP_005092

G1P2

 

2.56

  

stress resp.

SRV_02611_a_at

NP_005618

SGK

 

1.57

  

stress resp.

SRV_13637_a_at

NP_066362

IFITM3

 

1.51

  

stress resp.

SRV_01323_a_at

NP_002124

HMOX1

10.05

18.24

5.13

8.53

antioxidant

SRV_00444_a_at

NP_000572

GPX1

1.67

1.51

  

antioxidant

SRV_01423_a_at

NP_002412

MMP1

26.65

37.91

2.94

11.41

ECM remod.

SRV_01428_x_at

NP_002416

MMP10

22.86

30.96

2.87

 

ECM remod.

SRV_01430_at

NP_002418

MMP13

22.54

34.09

9.04

24.97

ECM remod.

SRV_01425_at

NP_002418

MMP13

19.64

23.46

3.10

2.60

ECM remod.

SRV_11420_at

NP_071405

MMP27

16.71

23.32

 

4.52

ECM remod.

SRV_02399_a_at

NP_004985

MMP9

15.22

23.05

3.51

15.69

ECM remod.

SRV_11423_at

NP_002418

MMP13

6.79

8.48

 

2.20

ECM remod.

SRV_11417_a_at

NP_002412

MMP1

6.42

8.48

  

ECM remod.

SRV_12016_at

NP_004521

MMP2

  

1.71

2.49

ECM remod.

SRV_02241_at

NP_004521

MMP2

  

1.66

2.34

ECM remod.

SRV_10485_at

NP_004521

MMP2

   

2.11

ECM remod.

SRV_00453_a_at

NP_000651

TGFB1

2.40

2.32

 

1.93

multifunctional

SRV_00328_at

NP_000387

CTSK

7.03

8.07

4.86

19.35

lysosome

SRV_00327_a_at

NP_000387

CTSK

3.72

4.73

2.94

8.23

lysosome

SRV_00326_a_at

NP_000387

CTSK

3.19

3.78

2.84

6.47

lysosome

SRV_02600_a_at

NP_001008530

LGMN

2.16

2.81

1.80

3.66

lysosome

SRV_05534_at

NP_796377

RAB7B

1.91

1.99

 

1.83

lysosome

SRV_02353_a_at

NP_004853

LITAF

1.88

2.29

 

1.75

lysosome

SRV_01134_at

NP_001684

ATP6V1B2

1.83

2.24

 

1.96

lysosome

SRV_02294_at

NP_004682

ATP6V0D1

1.73

2.33

 

2.73

lysosome

SRV_14287_a_at

NP_666023

CTSL

1.66

2.23

 

2.03

lysosome

SRV_02601_at

NP_001008530

LGMN

1.66

2.09

1.58

2.44

lysosome

SRV_05336_a_at

NP_001903

CTSL

 

1.75

 

1.69

lysosome

SRV_00294_s_at

NP_000299

PPGB

 

1.67

 

2.12

lysosome

SRV_01135_a_at

NP_001685

ATP6V0C

 

1.62

  

lysosome

SRV_01242_a_at

NP_001900

CTSD

 

1.62

 

2.25

lysosome

SRV_01559_a_at

NP_002769

PSAP

 

1.58

 

1.61

lysosome

SRV_00355_at

NP_000425

NEU1

 

1.57

 

1.87

lysosome

SRV_02141_at

NP_004306

ASAH1

 

1.56

 

2.15

lysosome

SRV_09661_at

NP_001805

CTSC

 

1.52

 

1.99

lysosome

SRV_01558_at

NP_001035931

PSAP

   

2.71

lysosome

SRV_00334_a_at

NP_001073279

GLB1

   

1.64

lysosome

SRV_10701_at

NP_000387

CTSK

   

1.58

lysosome

  1. Fold-level change of upregulated genes that have functions associated with a wounding response (identified by microarray analysis).
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