Table 1 Genes sampled for Holometabola and out-groups.
From: Single-copy nuclear genes resolve the phylogeny of the holometabolous insects
Genes | Number of base pairs | |
|---|---|---|
AATS alanyl-tRNA synthetase | 915 | |
CAD carbamoylphosphate synthase domain | 2057 | |
PGD 6-phosphogluconate dehydrogenase | 802 | |
SNF sans fille | 560 | |
TPI triosephosphate isomerase | 498 | |
RNA Pol II RNA polymerase II 215 Kda subunit | 899 | |
Taxa | Â | Â |
Order | Genus species | Genbank number |
Dictyoptera | Blatella germanica | GQ265573, GQ265596 GQ265621, GQ265633 GQ265647, GQ265663 |
Thysanoptera | Frankliniella fusca | GQ265566, GQ265588 GQ265614, --------------- GQ265641, GQ265657 |
Hymenoptera | Ametastegia equiseti | GQ265565, GQ265586* GQ265587*, GQ265613 GQ265628, GQ265640 GQ265656 |
Hymenoptera | Muscidifurax raptorellus | GQ265578, GQ265604* GQ265605*, GQ265606* GQ265624, GQ265634 GQ265650, GQ265668 |
Hymenoptera | Apis mellifera | XM_395392, XM_393888, XM_625087, XM_393440, XR_014889, XM_623278 |
Coleoptera | Tribolium castaneum | XM_970534, EU677538, XM_966958, XM_963178, XM_970400, XM_968377 |
Coleoptera | Strangalia bicolor | GQ265574, GQ265599 ---------------,--------------- ---------------, GQ265664 |
Neuroptera | Austronevrorthus brunneipennis | GQ265575, GQ265600 ---------------,--------------- GQ265649, GQ265665 |
Neuroptera | Kempynus sp. | GQ265567, GQ265589 GQ265615, --------------- ---------------,---------------- |
Neuroptera | Platystoechotes sp. | GQ265568, GQ265590 GQ265616, GQ265629 GQ265642, GQ265658 |
Raphidioptera | Mongoloraphidia martynovae | ---------------, GQ265597 GQ265622, --------------- ---------------,--------------- |
Megaloptera | Nigronia sp. | ---------------, GQ265598 GQ265623, --------------- GQ265648, --------------- |
Trichoptera | Hydropsyche phalerata | GQ265569, GQ265591 GQ265617, GQ265630 GQ265643, GQ265659 |
Lepidoptera | Heliothis virescens | GQ265570, GQ265592 GQ265618, --------------- GQ265644, GQ265660 |
Lepidoptera | Bombyx mori | M55993, EU032656, NM_001047060, DQ202313, NM_001126258, --------------- |
Diptera | Anopheles gambiae | XM_318757, XM_310823, XM_313091, XM_320869, XM_321467, XM_313929 |
Diptera | Tipula abdominalis | GQ265563, GQ265584 GQ265611, GQ265626 ---------------, --------------- |
Diptera | Musca domestica | GQ265564, GQ265585 GQ265612, GQ265627 GQ265639, --------------- |
Diptera | Drosophila melanogaster | NM_205934, X04813, M80598, NM_078490, NM_176587, NM_078569 |
Strepsiptera | Halictophagidae sp. | GQ265562, GQ265583 GQ265610, --------------- GQ265638, GQ265655 |
Strepsiptera | Mengenilla sp. | ---------------, GQ265580 ---------------, --------------- ---------------, GQ265651 |
Mecoptera | Nannochorista sp. | GQ265571, GQ265593* GQ265594*, GQ265619 GQ265631, GQ265645 GQ265661 |
Mecoptera | Panorpa sp. | GQ265572, GQ265595 GQ265620, GQ265632 GQ265646, GQ265662 |
Mecoptera | Boreus brumalis | GQ265576, GQ265601 ---------------, --------------- ---------------, GQ265666 |
Mecoptera | Australobittacus sp. | GQ265577, GQ265602*, GQ265603*, --------------- ---------------, GQ265667 |
Mecoptera | Microchorista philpotti | GQ265560, --------------- GQ265608, --------------- GQ265635, GQ265652 |
Mecoptera | Boreus sp. | ---------------, GQ265582 ---------------,--------------- GQ265637, GQ265654 |
Siphonaptera | Neotyphloceras sp. | GQ265579, GQ265607 ---------------, --------------- ---------------, GQ265669 |
Siphonaptera | Ctenocephalides felis | GQ265561, GQ265581 GQ265609, GQ265625 GQ265636, GQ265653 |