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Table 2 Binding parameters of interactions of soluble receptors with immobilized ligands.

From: Receptor oligomerization and beyond: a case study in bone morphogenetic proteins

Ligand

Type I receptor (analyte)

Type II receptor (analyte)

 

ActR-I

ActR-IB

BMPR-IA

BMPR-IB

ActR-II

ActR-IIB

BMPR-II

 

Mean

SD

Mean

Mean

SD

Mean

SD

Mean

SD

Mean

SD

mean

SD

BMP-2

             

k on × 10-4 [M-1s-1]

NB

 

NB

3.9

± 0.63

2.3

± 0.56

NE

 

NE

 

NE

 

k off × 103 [s-1]

NB

 

NB

1.9

± 0.47

8.0

± 1.38

> 100

 

> 100

 

> 100

 

K D (kin) [nM]

NB

 

NB

48

± 19.6

350

± 146

NE

 

NE

 

NE

 

K D (eq) [nM]

NB

 

NB

NE

 

NE

 

3800

± 608

3100

± 527

13000

± 2470

GDF-5

             

k on × 10-4 [M-1s-1]

NB

 

NB

0.5

± 0.162

0.3

± 0.09

NE

 

NE

 

NE

 

k off × 103 [s-1]

NB

 

NB

17

± 1.90

1.0

± 0.124

> 100

 

> 100

 

> 100

 

K D (kin) [nM]

NB

 

NB

3300

± 1439

300

± 123

NE

 

NE

 

NE

 

K D (eq) [nM]

NB

 

NB

NE

 

NE

 

22000

± 2420

4700

± 658

60000

± 9600

BMP-7

             

k on × 10-4 [M-1s-1]

NE

 

NB

0.3

± 0.05

3.1

± 0.38

NE

 

NE

 

NE

 

k off × 103 [s-1]

NE

 

NB

5.4

± 0.70

23

± 5.84

> 100

 

> 100

 

> 100

 

K D (kin) [nM]

NE

 

NB

1900

± 589

750

± 283

NE

 

NE

 

NE

 

K D (eq) [nM]

58000

± 29140

NB

NE

 

NE

 

880

± 61.6

2500

± 300

9100

± 1365

Activin-A

             

k on × 10-4 [M-1s-1]

NB

 

NB

NB

 

NB

 

30

± 3.30

14

± 2.38

10

± 1.23

k off × 103 [s-1]

NB

 

NB

NB

 

NB

 

44

± 10.6

9.6

± 2.78

76

± 19.3

K D (kin) [nM]

NB

 

NB

NB

 

NB

 

180

± 63.0

88

± 40.5

890

± 335

K D (eq) [nM]

NB

 

NB

NB

 

NB

 

NE

 

NE

 

NE

 
  1. The data obtained from the interaction soluble type I receptor ectodomains (ECDs) with the immobilized ligands were fitted to the 1:1 Langmuir binding model and the K D (kin) (bold) calculated as k off (× 103 s-1)/k on (× 10-4 M-1 s-1). Due to the fast kinetics of the interaction between type II receptors as analyte and the immobilized ligands BMP2, BMP7 and GDF5, the data could only be fitted by equilibrium dose response K D (eq). The dissociation rate constants (k off) of these interactions are >100 (× 103 s-1). All data represent mean values of three repeated measurements using at least six different analyte concentrations.
  2. ActR = activin receptor; BMP(R) = bone morphogenic protein (receptor); GDF = growth and differentiation factor; NB = no binding above background detected; NE = could not be evaluated; SD = standard deviation.