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Table 1 ftr expression in zebrafish embryos

From: A large new subset of TRIM genes highly diversified by duplication and positive selection in teleost fish

Class Sequences from control embryos (n= 32) Sequences from virus or IFN-stimulated embryos (n= 35)
1 11 (34%) 9 (26%)
  ftr14 (2x), ftr15 (3x), ftr39 (3x), ftr56, ftr65 (2x) ftr02 (2x), ftr15, ftr23, ftr39, ftr56 (2x), ftr64, ftr65
1b - 2 (6%)
   ftr15, ftr39
2 2 (6%) 3 (9%)
  ftr15*, ftr65* ftr15* (3x), ftr39
2b 1 (3%) 1 (3%)
  ftr06 ftr06
3 5 (16%) 6 (17%)
  ftr14*, ftr15*, ftr19l, ftr51, ftr56 ftr07, ftr14, ftr19l (2x), ftr39, ftr56
3b 4 (13%) 8 (23%)
  ftr03 (3x), ftr65 ftr02(3x), ftr03 (3x), ftr23, ftr34
5 2 (6%) -
  ftr15, ftr65  
5b 7 (22%) 3 (9%)
  ftr15, ftr23, ftr39* (3x), ftr65 (2x) ftr39*, ftr64*, ftr65
6 - 2 (6%)
   ftr56*, ftr64
  1. Group A finTRIM genes expressed in zebrafish embryos, as deduced from 3'RACE. Control embryos were either 72 hpf non-manipulated embryos (four sequences); 72 hpf, mcherry-transduced embryos (six sequences); 78 hpf non-manipulated embryos (10 sequences) or 96 hpf non-manipulated embryos (12 sequences). Stimulated embryos were either 72 hpf, zIFN1-transduced embryos (10 sequences); 78 hpf, SVCV-infected embryos (five sequences); or 96 hpf, IHNV-infected embryos (20 sequences). Multiple occurrences of ftr in different classes correspond either to allelic (*) or to splicing variants. Protein isoforms were classified according to Figure 3. Accession numbers [GenBank:AM941305–AM941371].