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Table 3 Results of LRT for positive selection

From: A large new subset of TRIM genes highly diversified by duplication and positive selection in teleost fish

Region1 Model2 2 Δ lnL p-value No sites
B30.2 complete PAML M1a-M2a 208.21 p < 0.001 16
  PAML M7–M8 231.62 p < 0.001 21
B30.2 complete PARRIS M1a-M2a 29.38 p < 0.001 ND
B30.2 1–285 PAML M1a-M2a 124.15 p < 0.001 13
  PAML M7–M8 129.55 p < 0.001 14
B30.2 286–485 PAML M1a-M2a 41.33 p < 0.001 3
  PAML M7–M8 47.95 p < 0.001 3
RBB complete PAML M1a-M2a 25.25 p < 0.001 4
  PAML M7–M8 18.20 p < 0.001 2
RBB complete PARRIS M1a-M2a 20.95 p < 0.001 ND
RBB 1–234 PAML M1a-M2a 21.04 p < 0.001 3
  PAML M7–M8 17.94 p < 0.001 3
RBB 238–465 PAML M1a-M2a 3.73 p = 0.155 0
  PAML M7–M8 1.57 p = 0.455 0
  1. 1 For fragmented regions, numbers correspond with positions of first and last nucleotides in the alignment.
  2. 2 The models M1a, M2a, M7 and M8 were employed, using either the program PAML or program PARRIS.