Table 1 Upregulation/downregulation ratios
From: Proteomic analysis of blastema formation in regenerating axolotl limbs
Biological process | 1 day | 4 days | 7 days |
|---|---|---|---|
Signaling associated (34) | 0.72 | 1.72 | 2.75 |
Ca2+ binding and translocation (17) | 0.36 | 0.63 | 1.29 |
Transcription and translation (78) | 0.79 | 1.52 | 2.04 |
Transcription (58) | 0.66 | 1.08 | 1.65 |
   Chromatin associated (14) | 1.60 | 1.60 | 1.40 |
   Transcription factors (21) | 0.9 | 1.57 | 2.00 |
   mRNA processing (23) | 0.24 | 0.62 | 1.50 |
Translation (20) | 1.50 | 7.00 | 4.00 |
   Ribosomal proteins (13) | 2.33 | 9.00 | 3.33 |
   Translation factors (7) | 0.67 | 5.00 | 6.00 |
Cytoskeleton (68) | 0.42 | 0.31 | 0.42 |
   Muscle (23) | 0.18 | 0.00 | 0.04 |
Non-muscle proteins (45) | 0.58 | 0.60 | 0.85 |
   Motility, shape, structural integrity (25) | 0.28 | 1.00 | 1.44 |
   Intracellular Movement (10) | 1.00 | 0.11 | 0.33 |
   Adhesion (5) | 1.50 | 1.50 | 1.50 |
   Other (5) | 3.00 | 0.66 | 0.66 |
Extracellular matrix (19) | 2.00 | 1.83 | 1.29 |
Metabolism (33) | 0.35 | 0.29 | 0.45 |
   Oxidative phosphorylation (8) | 0.33 | 0.17 | 0.14 |
   Glycolysis (8) | 0.33 | 0.14 | 0.33 |
   Glycogen (2) | 0.00 | 0.00 | 0.00 |
   Other (15) | 0.44 | 0.75 | 1.00 |
Cell protection (35) | 0.47 | 1.00 | 2.30 |
   Inflammation related (7) | 1.00 | 2.50 | 2.50 |
   Apoptosis related (13) | 0.25 | 0.71 | 1.40 |
   Chaperones (15) | 0.50 | 0.88 | 3.70 |
Degradation (11) | 0.86 | 1.00 | 2.00 |
Cell cycle (14) | 1.00 | 0.86 | 1.20 |