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Table 1 Correlation coefficients for composition differences in transcription factor clusters mapping to annotated genes and promoters

From: Clustered ChIP-Seq-defined transcription factor binding sites and histone modifications map distinct classes of regulatory elements

Composition correlation K562 Gm12878
prom-h - gene-any-h 0.46 0.04
prom-z - gene-any-z 0.75 0.32
prom-h - prom-z 0.70 0.37
gene-any-h - gene-any-z 0.99 0.99
gene-any-h - prom-z 0.75 0.32
gene-pos-h - gene-neg-h 0.40 0.56
gene-pos-z - gene-neg-z 0.66 0.81
gene-pos-h - prom-h 0.52 0.04
gene-pos-z - prom-z 0.89 0.39
gene-pos-h - gene-pos-z 0.93 0.97
gene-neg-h - gene-neg-z 0.99 0.88
  1. prom, promoter clusters; gene-any, gene clusters; gene-pos, gene clusters overlapping with H3K4me; gene-neg, gene clusters not overlapping with H3K4me; h, genes with high expression; z, genes with zero expression.