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Figure 1 | BMC Biology

Figure 1

From: The Lingulodinium circadian system lacks rhythmic changes in transcript abundance

Figure 1

Transcript abundance does not change between midday (ZT 6) and midnight (ZT 18). (A) Read counts from the two samples (as reads per kilobase per million, RPKM), obtained by mapping raw read data to 103,266 contig Trinity assembly, were plotted against each other. Contigs corresponding to rRNA were removed. Insets show (upper left) the fold difference for DESeq statistically significant differences (P adj <0.001) and (lower right) the MA plot used to determine statistically valid differences. (B) Transcript abundance does not change between true (ZT 18) and subjective (CT 18) midnight. CT, circadian time; MA, Magnitude-Average; ZT, Zeitgeber time.

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