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Fig. 4 | BMC Biology

Fig. 4

From: Time-resolved dual transcriptomics reveal early induced Nicotiana benthamiana root genes and conserved infection-promoting Phytophthora palmivora effectors

Fig. 4

Temporal dynamics of P. palmivora differentially expressed genes (DEGs) during infection time course. Fuzzy clustering was performed on P. palmivora DEGs. Only genes with cluster membership values ≥0.7 are shown, i.e. alpha cores (a). Functional distribution of secreted proteins for the grouped clusters is shown in (b). RXLR RXLR-effector, SCR small cysteine-rich protein, CWDE cell wall-degrading enzyme, NLP necrosis inducing protein, EPI protease inhibitor, Other other genes encoding proteins predicted to be secreted without specific functional category assigned

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