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Table 2 Representation of classes of putative extracellular proteins in P. palmivora secretome (strain LILI)

From: Time-resolved dual transcriptomics reveal early induced Nicotiana benthamiana root genes and conserved infection-promoting Phytophthora palmivora effectors

Functional category Number of proteins
Effectors and effector candidates 224
RXLR effectors 140
 RXLR-EER with WY domain 30
 RXLR-EER 93
 RXLR with WY domain 3
 RXLR only 14
Crinklers 15
Extracellular protease inhibitors (EPIs) 28
Necrosis-inducing proteins (NLPs) 24
Repeat-containing proteins 17
Elicitins/elicitors 42
Lectins including cellulose binding elicitor lectin (CBEL) 25
HxGPCExxxDD 42
Small cysteine-rich proteins (SCRs) 28
Cell wall-degrading enzymes (CWDEs) 143
 Glycosyl hydrolase 80
 Pectate lyase 16
 Pectin esterase 8
 Cellulase 6
Glucosidase 4
 Polysaccharide lyase 3
 Other 26
Cutinase 3
Protease 59
 Serine protease 27
 Cysteine protease 12
 Metalloendopeptidase 8
 Aspartyl protease 4
 Other 8
Oxidase 45
Kinase 41
Other enzymes 158
Hypothetical 1260