|
Total length (Mbp)
|
594.23
|
119.67
|
271.16
|
374.47
|
|
GC (%)
|
35.83
|
36.06
|
46.40
|
43.57
|
|
Number of scaffolds (≥ 0 bp)
|
4723
|
7
|
10
|
14
|
|
Number of scaffolds (≥ 1000 bp)
|
4704
|
7
|
10
|
14
|
|
Largest scaffold (Mbp)
|
13.61
|
30.43
|
75.07
|
43.27
|
|
N50 (Mbp)
|
2.12
|
23.46
|
59.13
|
29.96
|
|
N75 (Mbp)
|
0.77
|
19.70
|
48.59
|
28.44
|
|
Number of Ns per 100 kb
|
282.45a
|
155.60
|
155.85
|
44.13
|
|
Ambiguous bases
|
1,413,029
|
–
|
–
|
–
|
|
Number of genes
|
26,198
|
27,416
|
34,310
|
42,189
|
|
Exons
|
|
Number
|
158,059
|
141,044
|
154,104
|
178,353
|
|
Average number per gene
|
6.03
|
5.14
|
4.49
|
4.25
|
|
Total length (Mbp)
|
42.43
|
33.49
|
39.01
|
46.85
|
|
Average size (bp)
|
268.43
|
237.46
|
253.15
|
262.70
|
|
Average GC (%)
|
44.08
|
43.70
|
51.02
|
51.12
|
|
Introns
|
|
Number
|
105,663
|
86,212
|
85,484
|
94,345
|
|
Average number per gene
|
4.03
|
3.14
|
2.49
|
2.25
|
|
Total length (Mbp)
|
83.12
|
17.87
|
47.70
|
53.34
|
|
Average size (bp)
|
630.33
|
157.25
|
398.18
|
391.23
|
|
Average GC (%)
|
32.37
|
32.45
|
38.29
|
37.20
|
|
Transposable elementsb
|
|
% Total interspersed
|
46.07
|
13.32
|
37.39
|
44.40
|
|
Total interspersed total length (Mbp)
|
274.51
|
15.94
|
101.39
|
166.27
|
|
% Short interspersed nuclear elements (SINEs)
|
0.02
|
0.17
|
0.38
|
0.88
|
|
SINEs total length (Mbp)
|
0.13
|
0.20
|
1.02
|
3.31
|
|
% Long interspersed nuclear elements (LINEs)
|
2.43
|
1.07
|
2.91
|
1.29
|
|
LINEs total length (Mbp)
|
14.46
|
1.29
|
7.90
|
4.83
|
|
% Long terminal repeat (LTR) elements
|
22.82
|
6.35
|
19.31
|
21.09
|
|
LTR elements total length (Mbp)
|
135.71
|
7.61
|
52.36
|
78.98
|
|
% DNA elements
|
6.70
|
3.08
|
7.11
|
16.7
|
|
DNA elements total length (Mbp)
|
39.83
|
3.69
|
19.27
|
62.82
|
|
% Unclassified
|
14.20
|
2.64
|
7.68
|
4.36
|
|
Unclassified total length (Mbp)
|
84.38
|
3.16
|
20.84
|
16.32
|
