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Table 1 Main features of A. euteiches, A. astaci, and A. stellatus genomes

From: Genomics analysis of Aphanomyces spp. identifies a new class of oomycete effector associated with host adaptation

 

A. euteiches a

A. astaci b

A. stellatus b

Estimated genome size (Mb)

61

94

71.6

Total contig length (Mb)

56.9

45.3

62.1

GC content (%)

47.69

48.51

52.55

Protein-coding genes

19,548

16,479

25,573

Average exons per gene

3.7

2.7

3.2

Mean gene size (kb)

1.503

1.132

1.467

N50 (bp)

275,164

3659

34,018

Gene density (number of genes per Mb)

343

364

412

  1. aCombination of 454 and Illumina sequencing technologies
  2. bIllumina sequencing technology