Fig. 3
From: Position-specific intron retention is mediated by the histone methyltransferase SDG725
Knockdown of SDG725, not SDG708, causes pattern shifts of H3K36 methylations in rice. a An Integrative Genomics Viewer display of H3K36me1, H3K36me2, and H3K36me3 profiles for a gene-rich region in 725Ri-1, 708Ri-1, and WT rice plants. b The distribution patterns of H3K36me1 (left), H3K36me2 (middle), and H3K36me3 (right) in 725Ri-1, 708Ri-1, and WT rice plants, respectively. c, d Differential H3K36 methylation analysis between 725Ri-1 and WT plants (c) or between 708Ri-1 and WT rice plants (d). Each line in a heatmap represents a gene. The increased and decreased ChIP-seq signals (mutant vs. WT) are shown in red and green, respectively. Genes are sorted in descending order based on the number of red bins in the gene body (see details in Methods)