Fig. 6

Structural and nucleotide diversity at the Avr1d locus among 31 isolates of Phytophthora sojae reveal distinct haplotypes associated with virulence phenotypes. a Deletion in the vicinity of the Phytophthora sojae Avr1d locus. Yellow box represents exon and gray bars, 5′ and 3’ UTR. Orange boxes show the position of deletions in virulent isolates. b Schematic graph of the genotypes based on the deletion. Genotypes in gray background are different from the reference genome (isolate P6497). c Phenotypic response of the outliers (when the phenotype did not match the genotype based on the hypocotyl test) from the hydroponic assay. Responses showed here are representative of all isolates tested. All phenotypic responses of other tested isolates can be found in Additional file 3