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Table 1 Sequencing and assembly of the genome of YY channel catfish

From: The Y chromosome sequence of the channel catfish suggests novel sex determination mechanisms in teleost fish

A. Sequences generated for the assembly of YY channel catfish genome

Libraries

Number of reads

Average read length

Genome coverage

Usage

Raw PacBio reads

5,453,718

10,579 bp

57.7X

Contig assembly and assembly polishing

Corrected PacBio reads

2,240,010

16,192 bp

36.3X

Contig assembly

B. Assembly statistics

Total number of contigs

Total number of scaffold

Contig N50 (bp)

Scaffold N50 (bp)

Total assembled genome size in scaffolds (bp)

5830

3164

2,695,784

26,683,497

1,010,385,809

C. Assembly assessment

Complete BUSCOs

Fragmented BUSCOs

Total mapped BUSCOs

2442 (94.4%)

55 (2.1%)

2497 (96.5%)