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Table 1 Genes encoding proteins involved in the oxidative stress response that are differentially regulated in OXY and NAO S. salmonicida cells

From: Oxygen induces the expression of invasion and stress response genes in the anaerobic salmon parasite Spironucleus salmonicida

Protein name Abbr. In Fig. 2 OrthoMCL group Spironucleus salmonicida Giardia intestinalis WB Giardia intestinalis GS
Gene ID (SS50377_) NCBI accession OXY LFCa NAO LFCa Gene ID (GL50803_) LFCb Gene ID (GL50581_) LFCb
Flavodiiron protein FDP OG5_131036 10814 EST48966.1 2.0 1.1 10358 - 1626 - 0.9
FAD/FMN dependent oxidoreductase FMN OR OG5_127243 16942 EST43278.1 3.0 3.5 9719 - 2696 -
Hybrid cluster protein HCP OG5_133753 15959 EST44235.1 - 1.6 - 3042 - - -
NADH oxidase NADHOX OG5_126784 14284 EST45712.1 - 1.6 33769 - 2357 -
NADH oxidase NADHOX OG5_126784 13397 EST46593.1 - 1.5 33769 - 2357 -
NADH oxidase NADHOX OG5_126784 13934 EST45955.1 2.6 1.1 33769 - 2357 -
NADPH oxidoreductase NADPHOR OG5_130380 19222 EST41494.1 - - 1.8 15004 - 2479 -
NADPH oxidoreductase NADPHOR OG5_130380 19201 EST41475.1 3.9 2.2 15004 - 2479 -
Nitroreductase NR1 OG5_137896 18652 EST41818.1 3.7 2.5 c c c c
Peroxiredoxin PRX OG5_126593 13435 EST46632.1 1.1 - 14521 1.0 2907 1.4
Peroxiredoxin PRX OG5_126593 17099 EST43234.1 1.8 - 16076 2.0 2907 1.4
Peroxiredoxin PRX OG5_126593 12593 EST47325.1 2.6 2.1 n/a n/a n/a n/a
Peroxiredoxin PRX OG5_126593 15339 EST44769.1 3.8 2.0 n/a n/a n/a n/a
Rubrerythrin 1 RBR1 OG5_132921 11266 EST48653.1 2.6 3.1 n/a n/a n/a n/a
Rubrerythrin 1 RBR1 OG5_132921 11237 EST48625.1 4.2 4.8 n/a n/a n/a n/a
Rubrerythrin 2 RBR2 OG5_132921 11802 EST48036.1 3.0 1.4 n/a n/a n/a n/a
Superoxide reductase SOR OG5_144464 18190 EST42319.1 1.5 - d d d d
Thioredoxin THX OG5_132225 15062 EST45043.1 - 1.2 - 8064 - 3370 -
Thioredoxin THX OG5_132225 11035 EST48719.1 2.1 1.8 8064 3370 -
Thioredoxin THX OG5_129566 19116 EST41399.1 1.8 - 23888 - 0.8 3056 -
Thioredoxin THX OG5_150385 17283 EST43124.1 2.1 - 6289 - 4194 -
Thioredoxin THX OG5_155029 12820 EST47112.1 - - 1.0 14670 - 3386 -
Thioredoxin THX OG5_173146 10795 EST48951.1 - - 1.2 104250 - 661 -
Thioredoxin THX OG5_201295 15536 EST44537.1 1.3 - 9045 - 1623 -
Thioredoxin THX OG5_201287 13538 EST46454.1 - 1.1 9355 1.1 1609 -
Thioredoxin reductase THXR OG5_127532 14835 EST45259.1 2.3 - 9827 - 832 -
Carotenoid isomerase - OG5_131173 12033 EST47882.1 1.2 2.2 - - - -
Carotenoid isomerase - OG5_131173 15222 EST44881.1 1.6 2.2 - - - -
  1. a|Log2 (fold change)| > 1.0 with q-values < 0.05 from this study; '-' indicates not significant changes
  2. b|Log2 (fold change)| > 0.7 with p-values < 0.05 from Ma'ayeh et al. [25]; '-' indicates not significant changes
  3. cGiardia intestinalis encodes a different orthologue of nitroreductase
  4. dThe superoxide reductase gene is not predicted in the most recent version of the Giardia instestinalis genome however has been identified in [27]
  5. n/a indicates that the gene was not found in Giardia intestinalis