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Table 2 Genes encoding proteins involved in hydrogen and pyruvate metabolism that are differentially regulated in OXY and NAO S. salmonicida cells

From: Oxygen induces the expression of invasion and stress response genes in the anaerobic salmon parasite Spironucleus salmonicida

Protein name Abbr. In Fig. 2 OrthoMCL group Spironucleus salmonicida Giardia intestinalis WB Giardia intestinalis GS
Gene ID (SS50377_) NCBI accession OXY LFCa NAO LFCa Gene ID (GL50803_) LFCb Gene ID (GL50581_) LFCb
[2Fe-2S] Ferredoxin 1 FER OG5_126994 14776 EST45204.1 3.0 1.8 27266 - 3971 -
[2Fe-2S] Ferredoxin 2 FER OG5_126994 11457 EST48363.1 - 1.1 27266 - 3971 -
Pyruvate:ferredoxin oxidoreductase 1 PFO OG5_129721 12338 EST47643.1 4.1 1.7 114609 0.8 1047 -
Pyruvate:ferredoxin oxidoreductase 2 PFO OG5_129721 18347 EST42040.1 1.6 - 114609 0.8 1047 -
Pyruvate:ferredoxin oxidoreductase 3 PFO OG5_129721 15961 EST44237.1 1.4 - 114609 0.8 1047 -
Pyruvate:ferredoxin oxidoreductase 4 PFO OG5_129721 12070 EST47847.1 - 1.8 - 114609 0.8 1047 -
Pyruvate:ferredoxin oxidoreductase 5 PFO OG5_129721 10765 EST48995.1 2.0 1.2 114609 0.8 1047 -
[FeFe]-hydrogenase 4 HYDA OG5_127303 15891 EST44288.1 - 1.9 6304 - 4021 -
[FeFe]-hydrogenase 6 HYDA OG5_127303 10025 EST49607.1 - 3.0 - 6304 - 4021 -
HYDA assembly protein HydE HYDE OG5_155498 14972 EST44954.1 1.5 1.5 n/a n/a n/a n/a
HYDA assembly protein HydF HYDF OG5_168779 16918 EST43253.1 2.8 - n/a n/a n/a n/a
HYDA assembly protein HydG HYDG OG5_139637 17876 EST42561.1 3.3 1.4 n/a n/a n/a n/a
Acetyl-CoA synthetase ACS OG5_131604 10513 EST49290.1 1.5 1.4 13608 1.2 1568 -
Flavodoxin FLD OG5_127162 11261 EST48648.1 - - 1.1 15897 - 735 -
Flavodoxin FLD OG5_127162 16443 EST43822.1 - - 1.2 15897 - 735 -
Flavodoxin FLD OG5_127162 11221 EST48609.1 - 1.4 15897 - 735 -
Flavodoxin FLD OG5_127162 11235 EST48623.1 1.0 - 15897 - 735 -
Flavodoxin FLD OG5_127162 16430 EST43810.1 3.7 1.7 15897 - 735 -
Flavodoxin FLD OG5_127162 15167 EST45144.1 3.9 1.3 15897 - 735 -
Flavodoxin FLD OG5_127162 13883 EST45907.1 7.2 5.9 15897 - 735 -
  1. a|Log2 (fold change)| > 1.0 with q-values < 0.05 from this study; '-' indicates not significant changes
  2. b|Log2 (fold change)| > 0.7 with p-values < 0.05 from [25]; '-' indicates not significant changes
  3. n/a indicates that the gene was not found in Giardia intestinalis