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Table 4 Genes encoding cysteine and selenocysteine biosynthesis proteins that are differentially expressed in OXY or NAO S. salmonicida cells

From: Oxygen induces the expression of invasion and stress response genes in the anaerobic salmon parasite Spironucleus salmonicida

Protein name Abbr. In Fig. 3 OrthoMCL group Spironucleus salmonicida Giardia intestinalis WB Giardia intestinalis GS
Gene ID (SS50377_) NCBI accession OXY LFCa NAO LFCa Gene ID (GL50803_) LFCb Gene ID (GL50581_) LFCb
Cystathionine β-lyase - OG5_135774 11958 EST47938.1 1.6 1.0 n/a n/a n/a n/a
Cysteine synthase CS OG5_126662 16792 EST43431.1 2.0 1.3 n/a n/a n/a n/a
Peptide methionine sulfoxide reductase A MSRA OG5_126847 17334 EST43031.1 - - 1.0 n/a n/a n/a n/a
Peptide methionine sulfoxide reductase B MSRB OG5_127019 12928 EST46975.1 2.7 1.9 n/a n/a n/a n/a
Selenocysteine-specific elongation factor scEF OG5_130322 12176 EST47777.1 1.1 - n/a n/a n/a n/a
Selenophosphate synthase, NifS fusion SPS OG5_131755 16780 EST43726.1 1.5 1.6 n/a n/a n/a n/a
Selenoprotein W - OG5_134745 fx081 EST46492.1 - - 1.0 8394 - 4139 -
Selenoprotein W - SS50377_fx080 fx080 EST46486.1 - 1.4 - n/a n/a n/a n/a
Serine acetyltransferase SAT OG5_128713 17717 EST42696.1 1.4 1.4 n/a n/a n/a n/a
Seryl-tRNA synthetase SerS OG5_126677 12878 EST47068.1 1.2 2.0 101501 - 4129 -
Sulfide dehydrogenase SD OG5_126892 19044 EST41331.1 - 1.5 7195 - 3819 -
  1. a|Log2 (fold change)| > 1.0 with q-values < 0.05 from this study; '-' indicates not significant changes
  2. b|Log2 (fold change)| > 0.7 with p-values < 0.05 from Ma'ayeh et al. [25]; '-' indicates not significant changes
  3. n/a indicates that the gene was not found in Giardia intestinalis