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Table 4 Genes encoding cysteine and selenocysteine biosynthesis proteins that are differentially expressed in OXY or NAO S. salmonicida cells

From: Oxygen induces the expression of invasion and stress response genes in the anaerobic salmon parasite Spironucleus salmonicida

Protein name

Abbr. In Fig. 3

OrthoMCL group

Spironucleus salmonicida

Giardia intestinalis WB

Giardia intestinalis GS

Gene ID (SS50377_)

NCBI accession

OXY LFCa

NAO LFCa

Gene ID (GL50803_)

LFCb

Gene ID (GL50581_)

LFCb

Cystathionine β-lyase

-

OG5_135774

11958

EST47938.1

1.6

1.0

n/a

n/a

n/a

n/a

Cysteine synthase

CS

OG5_126662

16792

EST43431.1

2.0

1.3

n/a

n/a

n/a

n/a

Peptide methionine sulfoxide reductase A

MSRA

OG5_126847

17334

EST43031.1

-

- 1.0

n/a

n/a

n/a

n/a

Peptide methionine sulfoxide reductase B

MSRB

OG5_127019

12928

EST46975.1

2.7

1.9

n/a

n/a

n/a

n/a

Selenocysteine-specific elongation factor

scEF

OG5_130322

12176

EST47777.1

1.1

-

n/a

n/a

n/a

n/a

Selenophosphate synthase, NifS fusion

SPS

OG5_131755

16780

EST43726.1

1.5

1.6

n/a

n/a

n/a

n/a

Selenoprotein W

-

OG5_134745

fx081

EST46492.1

-

- 1.0

8394

-

4139

-

Selenoprotein W

-

SS50377_fx080

fx080

EST46486.1

- 1.4

-

n/a

n/a

n/a

n/a

Serine acetyltransferase

SAT

OG5_128713

17717

EST42696.1

1.4

1.4

n/a

n/a

n/a

n/a

Seryl-tRNA synthetase

SerS

OG5_126677

12878

EST47068.1

1.2

2.0

101501

-

4129

-

Sulfide dehydrogenase

SD

OG5_126892

19044

EST41331.1

-

1.5

7195

-

3819

-

  1. a|Log2 (fold change)| > 1.0 with q-values < 0.05 from this study; '-' indicates not significant changes
  2. b|Log2 (fold change)| > 0.7 with p-values < 0.05 from Ma'ayeh et al. [25]; '-' indicates not significant changes
  3. n/a indicates that the gene was not found in Giardia intestinalis
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BMC Biology

ISSN: 1741-7007

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