Skip to main content

Table 2 Summary of anchoring improvements for seven anophelines with chromosome mapping data

From: Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies

Assembly Mapped scaffolds Scaffolds added to map by Total scaffolds added Mapped scaffolds now with oriented neighbours Total base pairs added Percentage of assembly added Total percentage of assembly anchored
Synteny Agouti SYN + AGO
A. albimanus 31 0 2 0 2 0 2160 0.00 98.26
A. arabiensis 51 4 2 0 6 0 256,948 0.10 87.84
A. atroparvus 46 5 7 3 9 0 870,748 0.39 89.75
A. funestus 202 89 45 34 100 81 26,434,544 11.73 72.91
A. sinensis (Chinese) 52 18 NA NA 18 14 5,791,225 2.62 40.41
A. stephensi 99 102 52 45 110 77 47,779,259 21.20 61.96
A. stephensi (Indian) 118 76 47 33 90 92 10,975,818 4.96 83.66