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Table 1 Quantitative and qualitative expression changes in the movant strains

From: Macromolecular crowding links ribosomal protein gene dosage to growth rate in Vibrio cholerae

 -35-510-1120C2+479
Number of upregulated genes2 (1)62 (37)361 (64)439 (88)
Mean upregulationan/d1.5 ± 0.970.67 ± 0.410.78 ± 0.56
Number of downregulated genes6 (4)49 (2)301 (9)303 (17)
Mean downregulationan/d− 0.5 ± 0.24− 0.49 ± 0.26− 0.52 ± 0.29
Total number of altered genes8111 (39)662 (72)742 (105)
Altered functionsE, P, VE, O, R, V, NE, O, R, V, N, F, P, U
  1. The number of differentially expressed genes (p < 0.05) compared to parental strain in fast-growing conditions. The number in parenthesis represents genes whose expression varies more than 2-fold. The magnitude of expression change is quantified as the average of the Log2(FC) ± standard deviation
  2. aAverage of the Log2(FC) ± standard deviation. n/d not determined