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Fig. 7 | BMC Biology

Fig. 7

From: The evolution of the Puf superfamily of proteins across the tree of eukaryotes

Fig. 7

Predicted binding motifs of G.intestinalis PufSF proteins. a The tripartite recognition motifs (TRMs) of each Puf repeats of G.intestinalis Pufs were predicted, and the resulting sequence was used to search the conceptual transcriptome. The number of putative mRNA targets, which contain the motif in the 3′-UTR, is shown in bold. Asterisk denotes the same putative mRNA recognized by two different Pufs. b Sequence alignment of 18S rRNA shows the conservation of the sequence recognized by Nop9 as it was experimentally identified for S. cerevisae Nop9. Fraction of identical nucleotides at the particular position is coloured: dark blue > 80%, blue > 60%, light blue > 40%, white < 40%

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