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Table 1 Assembly parameters and genome features of the grape phylloxera genome, version V3.1

From: The genome sequence of the grape phylloxera provides insights into the evolution, adaptation, and invasion routes of an iconic pest

Parameters Numbers
Assembly Version 3.1
Contigs
Total assembly size 282,671,353
Number of contigs 17,162
Contig N50 length (bp) 74,750
Longest contig (bp) 718,286
Shortest contig (bp) 83
Number of contigs > 10 kb 4914
Mean (median) contig size, in bp 16,107 (1635)
Scaffolds
Number of scaffolds 10,492
Longest scaffold (bp) 2,080,308
Shortest scaffold (bp) 141
Number of scaffolds > 1 Mb 19
Mean (median) scaffold size, in bp 26,942 (1077)
N50 scaffold length (bb) 341,590
Genomic features (OGS 3.2)
Mean transcripts length (bp) 4653
Mean CDS length (bp) 1053
Mean exon length (bp) 244
Mean exon number per gene 5.4
Gene count 25,825
BUSCO analysis (genome v3.1)
Complete BUSCO 1563/1658 (94.2%)
Complete and single-copy BUSCOs 1531/1658 (92.3%)
Complete and duplicated BUSCOs 32/1658 (1.9%)
Fragmented BUSCOs 26/1658 (1.6%)
Missing BUSCOs 69/1658 (4.2%)
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