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Table 3 Summary of the number of viral loci identified in the genomes of Campoletis sonorensis and Hyposoter didymator, in comparison with data available in NCBI database

From: Genomic architecture of endogenous ichnoviruses reveals distinct evolutionary pathways leading to virus domestication in parasitic wasps

 

Campoletis sonorensis

Hyposoter didymator

Number of segments in NCBI a

25

50

Number of segments in genome

31

54

NCBI segments not found in genome

2 (CsA2, CsK)

0

Merged segments (compared to NCBI)b

0

6 (Hd2, Hd11, Hd17, Hd20, Hd26, Hd31–34)

Duplicated segments (compared to NCBI) c

0

3 (Hd23, Hd44, Hd45)

Number of newly identified segments

8 (CsX1 to CsX8)

6 (Hd46 to Hd51)

“Isolated” segment genes (short scaffolds)

2

1

Total number of segment loci in genome

33

55

Number of IVSPERs in NCBI a

0

3

Number of IVSPERs in genome

5

5

NCBI IVSPERs not found in genome

na

0

Newly identified IVSPERs

5

2

“Isolated” IVSPER genes

2

1

Total number of IVSPER loci in genome

7

6

  1. aNumbers of segments and IVSPER deposited in NCBI and available before this study
  2. bH. didymator viral loci corresponding to two segments formerly deposited in NCBI as distincts
  3. cH. didymator viral loci found in two copies in the wasp genome