2000-year-old pathogen genomes reconstructed from metagenomic analysis of Egyptian mummified individuals

Table 1 Overview of mapping results of samples positive for M. leprae and HBV

Sample	# reads prior mapping	Reference genome	# reads mapping	Mean coverage	Genome fraction covered by at least 3 non-duplicate reads	Avg. fragment length
Abusir1630b	70,437,731	M. leprae	2,762,380	35.35	97.1	41.8
Abusir1543 (combined)	265,942,056	HBV (AY738142)	1594	20.56	89.3	41.5
Abusir1543 (combined)	265,942,056	Human MT	16,513	46.45	100.0	46.7
Abusir1543b (shallow SG)	3,691,986	HBV (AY738142)	10	0.12	0.0	37.0
Abusir1543s (shallow SG)	2,881,554	HBV (AY738142)	83	0.97	10.4	37.4

For HBV, the mapping results of the shallow shotgun (SG) sequencing of the bone and soft tissue samples are shown as well as the results of the merged libraries, including deeper sequencing of bone and soft tissue samples

ISSN: 1741-7007