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Fig. 4 | BMC Biology

Fig. 4

From: LSTrAP-Crowd: prediction of novel components of bacterial ribosomes with crowd-sourced analysis of RNA sequencing data

Fig. 4

Analysis of thresholds used to predict proteins involved in protein synthesis. a The heatmaps indicate the F1 score (harmonic mean of precision and recall) as a function of the percentage of ribosomal protein neighbors (n value, x-axis) and PCC value (y-axis), for the 17 bacteria. The shade of cells in the heatmap indicate low (white) or high (dark blue) F1 score. The highest F1 score for each bacteria is indicated by a black dot, and the percentage of ribosomal protein neighbors (n) and PCC value (PCC) are indicated in the lower-right corner of the heatmap. b Distribution of the F1 scores for the 17 bacteria. Each dot in the swarmplot indicates an F1 score obtained at PCC values ranging from 0.1 to 1, and n values ranging from 10 to 100%

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