Skip to main content

Table 1 Genomic properties of the 17 bacteria and the RNA-seq sample statistics

From: LSTrAP-Crowd: prediction of novel components of bacterial ribosomes with crowd-sourced analysis of RNA sequencing data

Bacteria

Number of genes

Genome size (Mb)

Student groups analyzing the data

RNA-seq samples: passed QC/total

Campylobacter jejuni

1635

1.65

1

219/320

Clostridioides difficile

3769

4.27

1

182/381

Enterococcus faecalis

2579

3.11

1

81/195

Escherichia coli

4141

5.44

13

2494/7154

Haemophilus influenzae

2098

1.79

2

189/448

Helicobacter pylori

1720

1.62

1

84/167

Klebsiella pneumoniae

5141

5.78

2

536/639

Listeria monocytogenes

2817

2.78

2

370/572

Mycobacterium tuberculosis

4023

4.33

11

2414/6495

Mycoplasma pneumoniae

629

0.82

3

365/956

Neisseria gonorrhoeae

2159

2.15

1

102/371

Pseudomonas aeruginosa

6512

6.09

7

1372/2662

Salmonella enterica

4554

4.79

3

611/1284

Staphylococcus aureus

2638

2.90

5

1112/1963

Streptococcus pneumoniae

2043

2.13

2

422/647

Streptococcus pyogenes

1660

1.85

4

1340/1705

Vibrio cholerae

3648

4.00

1

167/311