Fig. 2
From: Automated identification of the mouse brain’s spatial compartments from in situ sequencing data
ISS patterns compared to the Allen Mouse Brain ISH-Atlas of one of the coronal mouse brain sections from mouse 1. a Detailed visualization of the 10 most (left) and least (right) matching genes as compared by KL divergence. b Visualization of spatial patterns of top-10 genes, from top to bottom: decoded ISS reads with density profile color code, low-resolution grayscale images of normalized ISS and Allen Brain Atlas ISH expression, and Allen Brain Atlas ISH data. c Visualization of spatial patterns of 10 least matching genes, from top to bottom as in b