From: Adaptive, diverse and de-centralized diagnostics are key to the future of outbreak response
Platform | Technology | Pros | Cons | Examples |
---|---|---|---|---|
RT-qPCR | DNA replication enzymes cycle through different temperatures to amplify specific SARS-CoV-2 sequences | • Well-established | • Requires centralized infrastructure | Thermo-Fisher TaqPath RT-qPCR COVID-19 kit |
• Gold standard for sensitivity and specificity | ||||
• Complex operation | ||||
• Slow (2–3 h) | ||||
Antigen assays | Immobilized antigen-specific antibodies bind and detect SARS-CoV-2 antigens in patient fluid | • Portable | • Poor detection during early-stage infection | Abbott BinaxNOW COVID-19 Ag Card, SDBiosensor STANDARD Q COVID-19 Ag |
• Simple operation | ||||
• Affordable | ||||
• Ample sensitivity | ||||
Serological assays | Immobilized viral proteins bind and detect anti – SARS-CoV-2 antibodies in patient fluid | • Portable | • Unable to detect early-stage infection | Cellex qSARS-CoV-2 IgG/IgM Rapid Test, Biolidics 2019-nCoV IgG/IgM Detection Kit |
• Simple operation | ||||
• Can detect past infection | ||||
CRISPR | CRISPR gene-editing enzyme cleaves SARS-CoV-2 sequences, generating colour output | • Simple operation | • New technology not well established | SHERLOCK, DETECTR |
• Sensitive (20–200 aM) | ||||
• Not portable | ||||
Toehold switch | Engineered gene circuits produce a colour upon detection of SARS-CoV-2 RNA | • Simple operation | • Still in development | Not yet approved for SARS-CoV-2 |
• Low-cost | ||||
• Easy storage conditions | ||||
Isothermal amplification | DNA replication enzymes active at a single temperature amplify SARS-CoV-2 sequences | • Portable | • May require specialized instrumentation | Abbott ID-NOW |
• Simple operation | ||||
• Sensitive, specific | ||||
• Quick (as fast as 5 min) | • Difficult to scale up |