TY - JOUR AU - Ferenci, T. PY - 2019 DA - 2019// TI - Irregularities in genetic variation and mutation rates with environmental stresses JO - Environ Microbiol VL - 21 UR - https://doi.org/10.1111/1462-2920.14822 DO - 10.1111/1462-2920.14822 ID - Ferenci2019 ER - TY - JOUR AU - Al Mamun, A. A. M. AU - Lombardo, M. -. J. AU - Shee, C. AU - Lisewski, A. M. AU - Gonzalez, C. AU - Lin, D. AU - Nehring, R. B. AU - Saint-Ruf, C. AU - Gibson, J. L. AU - Frisch, R. L. PY - 2012 DA - 2012// TI - Identity and function of a large gene network underlying mutagenic repair of DNA breaks JO - Science VL - 338 UR - https://doi.org/10.1126/science.1226683 DO - 10.1126/science.1226683 ID - Al Mamun2012 ER - TY - JOUR AU - Foster, P. L. PY - 2007 DA - 2007// TI - Stress-induced mutagenesis in bacteria JO - Crit Rev Biochem Mol Biol VL - 42 UR - https://doi.org/10.1080/10409230701648494 DO - 10.1080/10409230701648494 ID - Foster2007 ER - TY - JOUR AU - Galhardo, R. S. AU - Hastings, P. J. AU - Rosenberg, S. M. PY - 2007 DA - 2007// TI - Mutation as a stress response and the regulation of evolvability JO - Crit Rev Biochem Mol Biol VL - 42 UR - https://doi.org/10.1080/10409230701648502 DO - 10.1080/10409230701648502 ID - Galhardo2007 ER - TY - JOUR AU - Maharjan, R. P. AU - Ferenci, T. PY - 2017 DA - 2017// TI - A shifting mutational landscape in 6 nutritional states: stress-induced mutagenesis as a series of distinct stress input-mutation output relationships JO - PLoS Biol VL - 15 UR - https://doi.org/10.1371/journal.pbio.2001477 DO - 10.1371/journal.pbio.2001477 ID - Maharjan2017 ER - TY - JOUR AU - Hoffmann, G. R. AU - Gray, C. L. AU - Lange, P. B. AU - Marando, C. I. PY - 2015 DA - 2015// TI - A source of artifact in the lacZ reversion assay in Escherichia coli JO - Mutat Res Genet Toxicol Environ Mutagen VL - 784-785 UR - https://doi.org/10.1016/j.mrgentox.2015.04.008 DO - 10.1016/j.mrgentox.2015.04.008 ID - Hoffmann2015 ER - TY - JOUR AU - Smith, T. F. AU - Sadler, J. R. PY - 1971 DA - 1971// TI - The nature of lactose operator constitutive mutations JO - J Mol Biol VL - 59 UR - https://doi.org/10.1016/0022-2836(71)90051-9 DO - 10.1016/0022-2836(71)90051-9 ID - Smith1971 ER - TY - JOUR AU - Tang, M. AU - Wang, L. AU - Zhang, P. AU - Huang, P. AU - Wu, L. PY - 2009 DA - 2009// TI - Use Pgal agarose minimal plate to screen lac constitutive mutation JO - Ann Microbiol VL - 59 UR - https://doi.org/10.1007/BF03175618 DO - 10.1007/BF03175618 ID - Tang2009 ER - TY - JOUR AU - Miller, J. H. AU - Funchain, P. AU - Clendenin, W. AU - Huang, T. AU - Nguyen, A. AU - Wolff, E. AU - Yeung, A. AU - Chiang, J. -. H. AU - Garibyan, L. AU - Slupska, M. M. AU - Yang, H. PY - 2002 DA - 2002// TI - Escherichia coli strains (ndk) lacking nucleoside diphosphate kinase are powerful mutators for base substitutions and frameshifts in mismatch-repair-deficient strains JO - Genetics VL - 162 ID - Miller2002 ER - TY - JOUR AU - Kraovec, R. AU - Belavkin, R. V. AU - Aston, J. A. D. AU - Channon, A. AU - Aston, E. AU - Rash, B. M. AU - Kadirvel, M. AU - Forbes, S. AU - Knight, C. G. PY - 2014 DA - 2014// TI - Mutation rate plasticity in rifampicin resistance depends on Escherichia coli cell-cell interactions JO - Nat Commun VL - 5 UR - https://doi.org/10.1038/ncomms4742 DO - 10.1038/ncomms4742 ID - Kraovec2014 ER - TY - JOUR AU - Richards, H. AU - Gifford, D. R. AU - Hatcher, C. AU - Faulkner, K. J. AU - Belavkin, R. V. AU - Channon, A. AU - Aston, E. AU - McBain, A. J. AU - Knight, C. G. PY - 2017 DA - 2017// TI - Spontaneous mutation rate is a plastic trait associated with population density across domains of life JO - PLoS Biol VL - 15 UR - https://doi.org/10.1371/journal.pbio.2002731 DO - 10.1371/journal.pbio.2002731 ID - Richards2017 ER - TY - JOUR AU - Baek, J. H. AU - Lee, S. Y. PY - 2006 DA - 2006// TI - Novel gene members in the Pho regulon of Escherichia coli JO - FEMS Microbiol Lett VL - 264 UR - https://doi.org/10.1111/j.1574-6968.2006.00440.x DO - 10.1111/j.1574-6968.2006.00440.x ID - Baek2006 ER - TY - JOUR AU - Torriani, A. AU - Rothman, F. PY - 1961 DA - 1961// TI - Mutants of Escherichia coli constitutive for alkaline phosphatase JO - J Bacteriol VL - 81 UR - https://doi.org/10.1128/JB.81.5.835-836.1961 DO - 10.1128/JB.81.5.835-836.1961 ID - Torriani1961 ER - TY - JOUR AU - Neves, H. I. AU - Pereira, T. F. AU - Yagil, E. AU - Spira, B. PY - 2015 DA - 2015// TI - Ugp and PitA participate in the selection of PHO-constitutive mutants JO - J Bacteriol VL - 197 UR - https://doi.org/10.1128/JB.02566-14 DO - 10.1128/JB.02566-14 ID - Neves2015 ER - TY - JOUR AU - Echols, H. AU - Garen, A. AU - Garen, S. AU - Torriani, A. PY - 1961 DA - 1961// TI - Genetic control of repression of alkaline phosphatase in E. coli JO - J Mol Biol VL - 3 UR - https://doi.org/10.1016/S0022-2836(61)80055-7 DO - 10.1016/S0022-2836(61)80055-7 ID - Echols1961 ER - TY - JOUR AU - Aguena, M. AU - Spira, B. PY - 2009 DA - 2009// TI - Transcriptional processing of the pst operon of Escherichia coli JO - Curr Microbiol VL - 58 UR - https://doi.org/10.1007/s00284-008-9319-1 DO - 10.1007/s00284-008-9319-1 ID - Aguena2009 ER - TY - STD TI - Gardner S, McCleary W. Control of the phoBR regulon in Escherichia coli. EcoSal Plus. 2019; 8(2). https://doi.org/10.1128/ecosalplus.ESP-0006-2019. ID - ref17 ER - TY - JOUR AU - Heller, K. B. AU - Lin, E. C. AU - Wilson, T. H. PY - 1980 DA - 1980// TI - Substrate specificity and transport properties of the glycerol facilitator of Escherichia coli JO - J Bacteriol VL - 144 UR - https://doi.org/10.1128/JB.144.1.274-278.1980 DO - 10.1128/JB.144.1.274-278.1980 ID - Heller1980 ER - TY - JOUR AU - Tong, H. AU - Hu, Q. AU - Zhu, L. AU - Dong, X. PY - 2019 DA - 2019// TI - Prokaryotic aquaporins JO - Cells VL - 8 UR - https://doi.org/10.3390/cells8111316 DO - 10.3390/cells8111316 ID - Tong2019 ER - TY - JOUR AU - Yang, K. AU - Wang, M. AU - Metcalf, W. W. PY - 2009 DA - 2009// TI - Uptake of glycerol-2-phosphate via the ugp-encoded transporter in Escherichia coli K-12 JO - J Bacteriol VL - 191 UR - https://doi.org/10.1128/JB.00235-09 DO - 10.1128/JB.00235-09 ID - Yang2009 ER - TY - JOUR AU - Schuster, M. AU - Foxall, E. AU - Finch, D. AU - Smith, H. AU - De Leenheer, P. PY - 2017 DA - 2017// TI - Tragedy of the commons in the chemostat JO - PLoS ONE VL - 12 UR - https://doi.org/10.1371/journal.pone.0186119 DO - 10.1371/journal.pone.0186119 ID - Schuster2017 ER - TY - JOUR AU - Dandekar, A. A. AU - Chugani, S. AU - Greenberg, E. P. PY - 2012 DA - 2012// TI - Bacterial quorum sensing and metabolic incentives to cooperate JO - Science VL - 338 UR - https://doi.org/10.1126/science.1227289 DO - 10.1126/science.1227289 ID - Dandekar2012 ER - TY - JOUR AU - Rainey, P. B. AU - Rainey, K. PY - 2003 DA - 2003// TI - Evolution of cooperation and conflict in experimental bacterial populations JO - Nature VL - 425 UR - https://doi.org/10.1038/nature01906 DO - 10.1038/nature01906 ID - Rainey2003 ER - TY - JOUR AU - Drake, J. W. AU - Charlesworth, B. AU - Charlesworth, D. AU - Crow, J. F. PY - 1998 DA - 1998// TI - Rates of spontaneous mutation JO - Genetics VL - 148 ID - Drake1998 ER - TY - JOUR AU - Lee, H. AU - Popodi, E. AU - Tang, H. AU - Foster, P. L. PY - 2012 DA - 2012// TI - Rate and molecular spectrum of spontaneous mutations in the bacterium Escherichia coli as determined by whole-genome sequencing JO - Proc Natl Acad Sci U S A VL - 109 UR - https://doi.org/10.1073/pnas.1210309109 DO - 10.1073/pnas.1210309109 ID - Lee2012 ER - TY - JOUR AU - Maharjan, R. P. AU - Ferenci, T. PY - 2018 DA - 2018// TI - Escherichia coli mutation rates and spectra with combinations of environmental limitations JO - Microbiology VL - 164 UR - https://doi.org/10.1099/mic.0.000727 DO - 10.1099/mic.0.000727 ID - Maharjan2018 ER - TY - JOUR AU - Chueca, B. AU - Berdejo, D. AU - Gomes-Neto, N. J. AU - Pagán, R. AU - García-Gonzalo, D. PY - 2016 DA - 2016// TI - Emergence of hyper-resistant Escherichia coli MG1655 derivative strains after applying sub-inhibitory doses of individual constituents of essential oils JO - Front Microbiol VL - 7 UR - https://doi.org/10.3389/fmicb.2016.00273 DO - 10.3389/fmicb.2016.00273 ID - Chueca2016 ER - TY - JOUR AU - Thi, T. D. AU - López, E. AU - Rodríguez-Rojas, A. AU - Rodríguez-Beltrán, J. AU - Couce, A. AU - Guelfo, J. R. AU - Castañeda-García, A. AU - Blázquez, J. PY - 2011 DA - 2011// TI - Effect of recA inactivation on mutagenesis of Escherichia coli exposed to sublethal concentrations of antimicrobials JO - J Antimicro Chem VL - 66 UR - https://doi.org/10.1093/jac/dkq496 DO - 10.1093/jac/dkq496 ID - Thi2011 ER - TY - JOUR AU - Baharoglu, Z. AU - Mazel, D. PY - 2011 DA - 2011// TI - Vibrio cholerae triggers SOS and mutagenesis in response to a wide range of antibiotics: a route towards multiresistance JO - Antimicrob Agents Chemother VL - 55 UR - https://doi.org/10.1128/AAC.01549-10 DO - 10.1128/AAC.01549-10 ID - Baharoglu2011 ER - TY - JOUR AU - Elez, M. AU - Radman, M. AU - Matic, I. PY - 2007 DA - 2007// TI - The frequency and structure of recombinant products is determined by the cellular level of MutL JO - Proc Natl Acad Sci U S A VL - 104 UR - https://doi.org/10.1073/pnas.0610149104 DO - 10.1073/pnas.0610149104 ID - Elez2007 ER - TY - JOUR AU - Jin, D. J. AU - Gross, C. A. PY - 1988 DA - 1988// TI - Mapping and sequencing of mutations in the Escherichia coli rpoB gene that lead to rifampicin resistance JO - J Mol Biol VL - 202 UR - https://doi.org/10.1016/0022-2836(88)90517-7 DO - 10.1016/0022-2836(88)90517-7 ID - Jin1988 ER - TY - JOUR AU - Maughan, H. AU - Galeano, B. AU - Nicholson, W. L. PY - 2004 DA - 2004// TI - Novel rpoB mutations conferring rifampin resistance on Bacillus subtilis: global effects on growth, competence, sporulation, and germination JO - J Bacteriol VL - 186 UR - https://doi.org/10.1128/JB.186.8.2481-2486.2004 DO - 10.1128/JB.186.8.2481-2486.2004 ID - Maughan2004 ER - TY - JOUR AU - Cox, E. C. AU - Degnen, G. E. AU - Scheppe, M. L. PY - 1972 DA - 1972// TI - Mutator gene studies in Escherichia coli: the mutS gene JO - Genetics VL - 72 ID - Cox1972 ER - TY - JOUR AU - LeClerc, J. E. AU - Li, B. AU - Payne, W. L. AU - Cebula, T. A. PY - 1996 DA - 1996// TI - High mutation frequencies among Escherichia coli and salmonella pathogens JO - Science VL - 274 UR - https://doi.org/10.1126/science.274.5290.1208 DO - 10.1126/science.274.5290.1208 ID - LeClerc1996 ER - TY - JOUR AU - Li, G. -. M. PY - 2008 DA - 2008// TI - Mechanisms and functions of DNA mismatch repair JO - Cell Res VL - 18 UR - https://doi.org/10.1038/cr.2007.115 DO - 10.1038/cr.2007.115 ID - Li2008 ER - TY - JOUR AU - Luria, S. AU - Delbruck, M. PY - 1943 DA - 1943// TI - Mutations of bacteria from virus sensitivity to virus resistance JO - Genetics VL - 28 ID - Luria1943 ER - TY - JOUR AU - Foster, P. L. PY - 2006 DA - 2006// TI - Methods for determining spontaneous mutation rates JO - Methods Enzymol VL - 409 UR - https://doi.org/10.1016/S0076-6879(05)09012-9 DO - 10.1016/S0076-6879(05)09012-9 ID - Foster2006 ER - TY - JOUR AU - Lea, D. AU - Coulson, C. PY - 1949 DA - 1949// TI - The distribution of the numbers of mutants in bacterial populations JO - J Genet VL - 49 UR - https://doi.org/10.1007/BF02986080 DO - 10.1007/BF02986080 ID - Lea1949 ER - TY - JOUR AU - Jones, M. PY - 1993 DA - 1993// TI - Accounting for plating efficiency when estimating spontaneous mutation rates JO - Mutat Res VL - 292 UR - https://doi.org/10.1016/0165-1161(93)90146-Q DO - 10.1016/0165-1161(93)90146-Q ID - Jones1993 ER - TY - JOUR AU - Rosche, W. A. AU - Foster, P. L. PY - 2000 DA - 2000// TI - Determining mutation rates in bacterial populations JO - Methods (San Diego, Calif) VL - 20 UR - https://doi.org/10.1006/meth.1999.0901 DO - 10.1006/meth.1999.0901 ID - Rosche2000 ER - TY - JOUR AU - Galan, J. -. C. AU - Turrientes, M. C. AU - Baquero, M. R. AU - Rodriguez-Alcayna, M. AU - Martinez-Amado, J. AU - Martinez, J. -. L. AU - Baquero, F. PY - 2007 DA - 2007// TI - Mutation rate is reduced by increased dosage of mutL gene in Escherichia coli k-12 JO - FEMS Microbiol Lett VL - 275 UR - https://doi.org/10.1111/j.1574-6968.2007.00902.x DO - 10.1111/j.1574-6968.2007.00902.x ID - Galan2007 ER - TY - JOUR AU - Kolodkin-Gal, I. AU - Hazan, R. AU - Gaathon, A. AU - Carmeli, S. AU - Engelberg-Kulka, H. PY - 2007 DA - 2007// TI - A linear pentapeptide is a quorum-sensing factor required for mazEF-mediated cell death in Escherichia coli JO - Science VL - 318 UR - https://doi.org/10.1126/science.1147248 DO - 10.1126/science.1147248 ID - Kolodkin-Gal2007 ER - TY - JOUR AU - Aoki, S. K. AU - Pamma, R. AU - Hernday, A. D. AU - Bickham, J. E. AU - Braaten, B. A. AU - Low, D. A. PY - 2005 DA - 2005// TI - Contact-dependent inhibition of growth in Escherichia coli JO - Science VL - 309 UR - https://doi.org/10.1126/science.1115109 DO - 10.1126/science.1115109 ID - Aoki2005 ER - TY - JOUR AU - Aoki, S. K. AU - Diner, E. J. AU - de Roodenbeke, C. T. AU - Burgess, B. R. AU - Poole, S. J. AU - Braaten, B. A. AU - Jones, A. M. AU - Webb, J. S. AU - Hayes, C. S. AU - Cotter, P. A. AU - Low, D. A. PY - 2010 DA - 2010// TI - A widespread family of polymorphic contact-dependent toxin delivery systems in bacteria JO - Nature VL - 468 UR - https://doi.org/10.1038/nature09490 DO - 10.1038/nature09490 ID - Aoki2010 ER - TY - JOUR AU - Lemonnier, M. AU - Levin, B. R. AU - Romeo, T. AU - Garner, K. AU - Baquero, M. -. R. AU - Mercante, J. AU - Lemichez, E. AU - Baquero, F. AU - Blázquez, J. PY - 2008 DA - 2008// TI - The evolution of contact-dependent inhibition in non-growing populations of Escherichia coli JO - Proc Biol Sci VL - 275 ID - Lemonnier2008 ER - TY - JOUR AU - Sawant, A. A. AU - Casavant, N. C. AU - Call, D. R. AU - Besser, T. E. PY - 2011 DA - 2011// TI - Proximity-dependent inhibition in Escherichia coli isolates from cattle JO - Appl Environ Microbiol VL - 77 UR - https://doi.org/10.1128/AEM.03150-09 DO - 10.1128/AEM.03150-09 ID - Sawant2011 ER - TY - JOUR AU - Westfall, C. S. AU - Levin, P. A. PY - 2018 DA - 2018// TI - Comprehensive analysis of central carbon metabolism illuminates connections between nutrient availability, growth rate, and cell morphology in Escherichia coli JO - PLos Genet VL - 14 UR - https://doi.org/10.1371/journal.pgen.1007205 DO - 10.1371/journal.pgen.1007205 ID - Westfall2018 ER - TY - JOUR AU - Saier, M. AU - Feucht, B. AU - Hofstadter, L. PY - 1976 DA - 1976// TI - Regulation of carbohydrate uptake and adenylate cyclase activity mediated by the enzymes II of the phosphoenolpyruvate: sugar phosphotransferase system in Escherichia coli JO - J Biol Chem VL - 251 ID - Saier1976 ER - TY - JOUR AU - Park, Y. -. H. AU - Lee, B. R. AU - Seok, Y. -. J. AU - Peterkofsky, A. PY - 2006 DA - 2006// TI - In vitro reconstitution of catabolite repression in Escherichia coli JO - J Biol Chem VL - 281 UR - https://doi.org/10.1074/jbc.M512672200 DO - 10.1074/jbc.M512672200 ID - Park2006 ER - TY - JOUR AU - Cole, S. AU - Eiglmeier, K. AU - Ahmed, S. AU - Honore, N. AU - Elmes, L. AU - Anderson, W. AU - Weiner, J. PY - 1988 DA - 1988// TI - Nucleotide sequence and gene-polypeptide relationships of the glpABC operon encoding the anaerobic sn-glycerol-3-phosphate dehydrogenase of Escherichia coli k-12 JO - J Bacteriol VL - 170 UR - https://doi.org/10.1128/JB.170.6.2448-2456.1988 DO - 10.1128/JB.170.6.2448-2456.1988 ID - Cole1988 ER - TY - JOUR AU - Yeh, J. I. AU - Chinte, U. AU - Du, S. PY - 2008 DA - 2008// TI - Structure of glycerol-3-phosphate dehydrogenase, an essential monotopic membrane enzyme involved in respiration and metabolism JO - Proc Natl Acad Sci U S A VL - 105 UR - https://doi.org/10.1073/pnas.0712331105 DO - 10.1073/pnas.0712331105 ID - Yeh2008 ER - TY - JOUR AU - Joyce, A. R. AU - Reed, J. L. AU - White, A. AU - Edwards, R. AU - Osterman, A. AU - Baba, T. AU - Mori, H. AU - Lesely, S. A. AU - Palsson, B. Ø. AU - Agarwalla, S. PY - 2006 DA - 2006// TI - Experimental and computational assessment of conditionally essential genes in Escherichia coli JO - J Bacteriol VL - 188 UR - https://doi.org/10.1128/JB.00740-06 DO - 10.1128/JB.00740-06 ID - Joyce2006 ER - TY - JOUR AU - Brown, G. AU - Singer, A. AU - Lunin, V. V. AU - Proudfoot, M. AU - Skarina, T. AU - Flick, R. AU - Kochinyan, S. AU - Sanishvili, R. AU - Joachimiak, A. AU - Edwards, A. M. AU - Savchenko, A. AU - Yakunin, A. F. PY - 2009 DA - 2009// TI - Structural and biochemical characterization of the type II fructose-1,6-bisphosphatase glpx from Escherichia coli JO - J Biol Chem VL - 284 UR - https://doi.org/10.1074/jbc.M808186200 DO - 10.1074/jbc.M808186200 ID - Brown2009 ER - TY - JOUR AU - Blattner, F. R. AU - Plunkett, G. AU - Bloch, C. A. AU - Perna, N. T. AU - Burland, V. AU - Riley, M. AU - Collado-Vides, J. AU - Glasner, J. D. AU - Rode, C. K. AU - Mayhew, G. F. AU - Gregor, J. AU - Davis, N. W. AU - Kirkpatrick, H. A. AU - Goeden, M. A. AU - Rose, D. J. AU - Mau, B. AU - Shao, Y. PY - 1997 DA - 1997// TI - The complete genome sequence of Escherichia coli K-12 JO - Science (New York, N.Y.) VL - 277 UR - https://doi.org/10.1126/science.277.5331.1453 DO - 10.1126/science.277.5331.1453 ID - Blattner1997 ER - TY - JOUR AU - Stasi, R. AU - Neves, H. I. AU - Spira, B. PY - 2019 DA - 2019// TI - Phosphate uptake by the phosphonate transport system PhnCDE JO - BMC Microbiol VL - 19 UR - https://doi.org/10.1186/s12866-019-1445-3 DO - 10.1186/s12866-019-1445-3 ID - Stasi2019 ER - TY - JOUR AU - Larson, T. J. AU - Ehrmann, M. AU - Boos, W. PY - 1983 DA - 1983// TI - Periplasmic glycerophosphodiester phosphodiesterase of Escherichia coli, a new enzyme of the glp regulon JO - J Biol Chem VL - 258 ID - Larson1983 ER - TY - JOUR AU - Flynn, J. M. AU - Neher, S. B. AU - Kim, Y. I. AU - Sauer, R. T. AU - Baker, T. A. PY - 2003 DA - 2003// TI - Proteomic discovery of cellular substrates of the ClpXP protease reveals five classes of ClpX-recognition signals JO - Mol Cell VL - 11 UR - https://doi.org/10.1016/S1097-2765(03)00060-1 DO - 10.1016/S1097-2765(03)00060-1 ID - Flynn2003 ER - TY - JOUR AU - Whitehead, D. J. AU - Wilke, C. O. AU - Vernazobres, D. AU - Bornberg-Bauer, E. PY - 2008 DA - 2008// TI - The look-ahead effect of phenotypic mutations JO - Biol Direct VL - 3 UR - https://doi.org/10.1186/1745-6150-3-18 DO - 10.1186/1745-6150-3-18 ID - Whitehead2008 ER - TY - JOUR AU - Cairns, J. AU - Overbaugh, J. AU - Miller, S. PY - 1988 DA - 1988// TI - The origin of mutants JO - Nature VL - 335 UR - https://doi.org/10.1038/335142a0 DO - 10.1038/335142a0 ID - Cairns1988 ER - TY - JOUR AU - Hall, B. G. PY - 1990 DA - 1990// TI - Spontaneous point mutations that occur more often when advantageous than when neutral JO - Genetics VL - 126 ID - Hall1990 ER - TY - JOUR AU - Cohen, S. E. AU - Walker, G. C. PY - 2010 DA - 2010// TI - The transcription elongation factor NusA is required for stress-induced mutagenesis in Escherichia coli JO - Curr Biol VL - 20 UR - https://doi.org/10.1016/j.cub.2009.11.039 DO - 10.1016/j.cub.2009.11.039 ID - Cohen2010 ER - TY - JOUR AU - Fitzgerald, D. M. AU - Rosenberg, S. M. PY - 2019 DA - 2019// TI - What is mutation? A chapter in the series: how microbes “jeopardize” the modern synthesis JO - PLos Genet VL - 15 UR - https://doi.org/10.1371/journal.pgen.1007995 DO - 10.1371/journal.pgen.1007995 ID - Fitzgerald2019 ER - TY - JOUR AU - Roth, J. R. AU - Kugelberg, E. AU - Reams, A. B. AU - Kofoid, E. AU - Andersson, D. I. PY - 2006 DA - 2006// TI - Origin of mutations under selection: the adaptive mutation controversy JO - Annu Rev Microbiol VL - 60 UR - https://doi.org/10.1146/annurev.micro.60.080805.142045 DO - 10.1146/annurev.micro.60.080805.142045 ID - Roth2006 ER - TY - JOUR AU - Maisnier-Patin, S. AU - Roth, J. PY - 2015 DA - 2015// TI - The origin of mutants under selection: how natural selection mimics mutagenesis (adaptive mutation). cold spring harb perspect biol 7: a018176 JO - Cold Spring Harb Perspect Biol VL - 7 UR - https://doi.org/10.1101/cshperspect.a018176 DO - 10.1101/cshperspect.a018176 ID - Maisnier-Patin2015 ER - TY - JOUR AU - Yosef, I. AU - Edgar, R. AU - Levy, A. AU - Amitai, G. AU - Sorek, R. AU - Munitz, A. AU - Qimron, U. PY - 2016 DA - 2016// TI - Natural selection underlies apparent stress-induced mutagenesis in a bacteriophage infection model JO - Nat Microbiol VL - 1 UR - https://doi.org/10.1038/nmicrobiol.2016.47 DO - 10.1038/nmicrobiol.2016.47 ID - Yosef2016 ER - TY - JOUR AU - Zhang, Z. AU - Saier Jr, M. H. PY - 2016 DA - 2016// TI - Transposon-mediated activation of the Escherichia coli glpFK operon is inhibited by specific DNA-binding proteins: implications for stress-induced transposition events JO - Mutat Res Fundam Mol Mech Mutagen VL - 793 UR - https://doi.org/10.1016/j.mrfmmm.2016.10.003 DO - 10.1016/j.mrfmmm.2016.10.003 ID - Zhang2016 ER - TY - JOUR AU - Foster, P. L. PY - 2004 DA - 2004// TI - Rebuttal: growth under selection stimulates Lac(+) reversion (Roth and Andersson) JO - J Bacteriol VL - 186 UR - https://doi.org/10.1128/JB.186.15.4861.2004 DO - 10.1128/JB.186.15.4861.2004 ID - Foster2004 ER - TY - JOUR AU - Smith, P. AU - Schuster, M. PY - 2019 DA - 2019// TI - Public goods and cheating in microbes JO - Curr Biol CB VL - 29 UR - https://doi.org/10.1016/j.cub.2019.03.001 DO - 10.1016/j.cub.2019.03.001 ID - Smith2019 ER - TY - JOUR AU - Hardin, G. PY - 1994 DA - 1994// TI - The tragedy of the unmanaged commons JO - Trends Ecol Evol VL - 9 UR - https://doi.org/10.1016/0169-5347(94)90097-3 DO - 10.1016/0169-5347(94)90097-3 ID - Hardin1994 ER - TY - JOUR AU - Stewart, A. J. AU - Plotkin, J. B. PY - 2014 DA - 2014// TI - Collapse of cooperation in evolving games JO - Proc Natl Acad Sci U S A VL - 111 UR - https://doi.org/10.1073/pnas.1408618111 DO - 10.1073/pnas.1408618111 ID - Stewart2014 ER - TY - JOUR AU - Cremer, J. AU - Melbinger, A. AU - Wienand, K. AU - Henriquez, T. AU - Jung, H. AU - Frey, E. PY - 2019 DA - 2019// TI - Cooperation in microbial populations: theory and experimental model systems JO - J Mol Biol VL - 431 UR - https://doi.org/10.1016/j.jmb.2019.09.023 DO - 10.1016/j.jmb.2019.09.023 ID - Cremer2019 ER - TY - JOUR AU - Jin, Z. AU - Li, J. AU - Ni, L. AU - Zhang, R. AU - Xia, A. AU - Jin, F. PY - 2018 DA - 2018// TI - Conditional privatization of a public siderophore enables Pseudomonas aeruginosa to resist cheater invasion JO - Nat Commun VL - 9 UR - https://doi.org/10.1038/s41467-018-03791-y DO - 10.1038/s41467-018-03791-y ID - Jin2018 ER - TY - JOUR AU - Yurtsev, E. A. AU - Chao, H. X. AU - Datta, M. S. AU - Artemova, T. AU - Gore, J. PY - 2013 DA - 2013// TI - Bacterial cheating drives the population dynamics of cooperative antibiotic resistance plasmids JO - Mol Syst Biol VL - 9 UR - https://doi.org/10.1038/msb.2013.39 DO - 10.1038/msb.2013.39 ID - Yurtsev2013 ER - TY - JOUR AU - Koschwanez, J. H. AU - Foster, K. R. AU - Murray, A. W. PY - 2011 DA - 2011// TI - Sucrose utilization in budding yeast as a model for the origin of undifferentiated multicellularity JO - PLoS Biol VL - 9 UR - https://doi.org/10.1371/journal.pbio.1001122 DO - 10.1371/journal.pbio.1001122 ID - Koschwanez2011 ER - TY - JOUR AU - Fiegna, F. AU - Velicer, G. J. PY - 2003 DA - 2003// TI - Competitive fates of bacterial social parasites: persistence and self-induced extinction of Myxococcus xanthus cheaters JO - Proc Biol Sci VL - 270 UR - https://doi.org/10.1098/rspb.2003.2387 DO - 10.1098/rspb.2003.2387 ID - Fiegna2003 ER - TY - JOUR AU - Medaney, F. AU - Dimitriu, T. AU - Ellis, R. J. AU - Raymond, B. PY - 2016 DA - 2016// TI - Live to cheat another day: bacterial dormancy facilitates the social exploitation of ß-lactamases JO - ISME J VL - 10 UR - https://doi.org/10.1038/ismej.2015.154 DO - 10.1038/ismej.2015.154 ID - Medaney2016 ER - TY - JOUR AU - Lenski, R. E. AU - Hattingh, S. E. PY - 1986 DA - 1986// TI - Coexistence of two competitors on one resource and one inhibitor: a chemostat model based on bacteria and antibiotics JO - J Theor Biol VL - 122 UR - https://doi.org/10.1016/S0022-5193(86)80226-0 DO - 10.1016/S0022-5193(86)80226-0 ID - Lenski1986 ER - TY - JOUR AU - Luo, H. AU - Benner, R. AU - Long, R. A. AU - Hu, J. PY - 2009 DA - 2009// TI - Subcellular localization of marine bacterial alkaline phosphatases JO - Proc Natl Acad Sci U S A VL - 106 UR - https://doi.org/10.1073/pnas.0907586106 DO - 10.1073/pnas.0907586106 ID - Luo2009 ER - TY - CHAP AU - Lin, E. PY - 1984 DA - 1984// TI - Glycerol utilization by facilitated diffusion coupled to phosphorylation in bacteria BT - The Cell Membrane PB - Springer CY - Boston, MA ID - Lin1984 ER - TY - BOOK AU - Miller, J. H. PY - 1992 DA - 1992// TI - A short course in bacterial genetics: a laboratory manual and handbook for Escherichia coli and related bacteria PB - Cold Spring Harbor Laboratory CY - Cold Spring Harbor, N.Y. ID - Miller1992 ER - TY - JOUR AU - Datsenko, K. A. AU - Wanner, B. L. PY - 2000 DA - 2000// TI - One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products JO - Proc Natl Acad Sci U S A VL - 97 UR - https://doi.org/10.1073/pnas.120163297 DO - 10.1073/pnas.120163297 ID - Datsenko2000 ER - TY - JOUR AU - Murphy, K. C. AU - Campellone, K. G. AU - Poteete, A. R. PY - 2000 DA - 2000// TI - PCR-mediated gene replacement in Escherichia coli JO - Gene VL - 246 UR - https://doi.org/10.1016/S0378-1119(00)00071-8 DO - 10.1016/S0378-1119(00)00071-8 ID - Murphy2000 ER -