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Table 3 Read-based quantification of repeats by sampling 4 million read pairs per library. Density of different classes of  repeats annotated by RepeatMasker using a combined library of the RepeatModeler de novo library from each race (manual curation of the P24X0 library, used for reclassification of the three other de novo libraries), the Arthropod library from Repbase, and libraries from each race from HelitronScanner and RepeatExplorer2, across males of four chromosomal races of the viatica species group. TR tandem repeats, GP genome proportion (% reads)

From: Comparative analysis of morabine grasshopper genomes reveals highly abundant transposable elements and rapidly proliferating satellite DNA repeats

Repeat type

P24X0

P24XY

P45bX0

P45bXY

 

GP

GP

GP

GP

SINE

1.23

1.49

1.81

1.27

LINE

15.48

14.26

14.91

15.09

LTR

3.39

3.29

3.81

3.28

DNA

13.83

14.43

13.95

13.77

Helitron

23.17

24.84

28.73

25.67

TR

7.82

6.06

7.53

8.85

Unclassified

9.86

8.65

8.50

7.51

Total

74.78

73.02

79.44

75.44