Table 1 Newly sampled species in this study (NA data unavailable)
From: An updated tribal classification of Lamiaceae based on plastome phylogenomics
Systematic assignment | Species | Locality | Clean reads | Mean coverage of base (x) | GenBank accession numbers | |
|---|---|---|---|---|---|---|
Phrymaceae (outgroup) | Â | Mimulus sp. | The United States Botanic Garden (USBG), United States | 19,584,540 | 478 | MT473772 |
Ajugoideae | Ajugeae | Caryopteris forrestii Diels | Lijiang, Yunnan, China | 67,295,160 | 485 | MT473742 |
Ajugoideae | Teucrieae | Schnabelia oligophylla Hand.-Mazz. | Kunming, Yunnan, China | 67,359,376 | 726 | MT473777 |
Ajugoideae | Clerodendreae | Clerodendrum japonicum (Thunb.) Sweet | Kunming, Yunnan, China | 69,357,954 | 854 | MT473745 |
Ajugoideae | Clerodendreae | Clerodendrum trichotomum Thunb. | Huairou, Beijing, China | 69,621,568 | 536 | MT473746 |
Ajugoideae | Rotheceae | Rotheca serrata (L.) Steane & Mabb. | Kunming, Yunnan, China | 69,698,896 | 328 | MT473776 |
Callicarpioideae | – | Callicarpa americana L. | Gainesville, Florida, United States | 69,222,992 | NA | -- |
Callicarpioideae | – | Callicarpa arborea Roxb. | Kunming, Yunnan, China | 70,066,596 | 341 | MT473738 |
Callicarpioideae | – | Callicarpa brevipes (Benth.) Hance | Guangzhou, Guangdong, China | 68,119,222 | 383 | MT473739 |
Callicarpioideae | – | Callicarpa macrophylla Vahl | Kunming, Yunnan, China | 69,104,110 | 499 | MT473740 |
Callicarpioideae | – | Callicarpa peichieniana Chun & S.L. Chen ex H. Ma & W.B. Yu | Guangzhou, Guangdong, China | 68,759,068 | 215 | MT473741 |
Cymarioideae | – | Cymaria dichotoma Benth. | Changjiang, Hainan, China | 68,070,464 | 1189 | MT473753 |
Lamioideae | Paraphlomideae | Paraphlomis javanica (Blume) Prain | Kunming, Yunnan, China | 66,797,022 | 239 | MT473773 |
Lamioideae | Gomphostemmateae | Gomphostemma lucidum Wall. ex Benth. | Changjiang, Hainan, China | 66,781,246 | 274 | MT473764 |
Lamioideae | Gomphostemmateae | Chelonopsis souliei (Bonati) Merr. | Litang, Sichuan, China | 67,646,436 | 572 | MT473743 |
Lamioideae | Colquhounieae | Colquhounia coccinea Wall. | Kunming, Yunnan, China | 66,842,836 | 171 | MT473749 |
Lamioideae | Colquhounieae | Colquhounia seguinii Vaniot | Kunming, Yunnan, China | 66,760,344 | 337 | MT473750 |
Lamioideae | Colquhounieae | Colquhounia vestita Wall. | Cuona, Xizang, China | 67,753,130 | 192 | MT473751 |
Lamioideae | Lamieae | Lamium amplexicaule L. | Zuogong, Xizang, China | 67,339,814 | 3104 | MT473770 |
Lamioideae | Synandreae | Macbridea alba Chapm. | The United States Botanic Garden (USBG), United States | 20,514,794 | 474 | MT473771 |
Lamioideae | Stachydeae | Galeopsis bifida Boenn. | Deqin, Yunnan, China | 67,442,714 | 500 | MT473759 |
Nepetoideae | Elsholtzieae | Elsholtzia densa Benth. | Shangri-La, Yunnan, China | 18,273,016 | 888 | MT473757 |
Nepetoideae | Elsholtzieae | Elsholtzia rugulosa Hemsl. | Kunming, Yunnan, China | 67,318,028 | 553 | MT473758 |
Nepetoideae | Ocimeae | Siphocranion flavidum Y.P. Chen & C.L. Xiang | Malipo, Yunnan, China | 13,829,468 | 436 | MT473778 |
Nepetoideae | Ocimeae | Siphocranion macranthum (Hook. f.) C.Y. Wu | Nanchuan, Congqing, China | 13,860,798 | 241 | MT473779 |
Nepetoideae | Ocimeae | Hanceola exserta Y.Z. Sun ex C.Y. Wu | Hezhou, Guangxi, China | 67,557,758 | 203 | MT473765 |
Nepetoideae | Ocimeae | Isodon amethystoides (Benth.) H. Hara | Lin'an, Zhejiang, China | 25,146,824 | 696 | MT473767 |
Nepetoideae | Ocimeae | Isodon lophanthoides (Buch.-Ham. ex D. Don) H. Hara | Kunming, Yunnan, China | 40,730,966 | 316 | MT473768 |
Nepetoideae | Ocimeae | Isodon ternifolius (D. Don) Kudô | Longling, Yunnan, China | 32,984,960 | 542 | MT473769 |
Nepetoideae | Ocimeae | Coleus xanthanthus C.Y. Wu & Y.C. Huang | Mengla, Yunnan, China | 25,669,120 | 821 | MT473748 |
Nepetoideae | Menheae | Dracocephalum taliense Forrest | Heqing, Yunnan, China | 68,863,176 | 446 | MT473756 |
Nepetoideae | Menheae | Clinopodium abyssinicum (Benth.) Kuntze | Kabarnet, Baringo, Kenya | 48,657,815 | 833 | MT473747 |
Peronematoideae | – | Garrettia siamensis H.R. Fletcher | Mengla, Yunnan, China | 69,566,486 | 1905 | MT473760 |
Peronematoideae | – | Hymenopyramis cana Craib | Changjiang, Hainan, China | 66,946,216 | 298 | MT473766 |
Premnoideae | – | Premna szemaoensis C. P'ei | Kunming, Yunnan, China | 69,409,616 | 477 | MT473775 |
Premnoideae | – | Premna vietnamensis Bo Li | K'Bang, Gia Lai, Vietnam | 80,675,070 | 460 | MT473774 |
Premnoideae | – | Gmelina arborea Roxb. ex Sm. | Mengla, Yunnan, China | 67,974,942 | 493 | MT473761 |
Premnoideae | – | Gmelina hainanensis Oliv. | Kunming, Yunnan, China | 67,354,640 | 1527 | MT473762 |
Premnoideae | – | Gmelina philippensis Cham. | Mengla, Yunnan, China | 69,953,046 | 479 | MT473763 |
Prostantheroideae | Chloantheae | Chloanthes coccinea Bartl. | Australian National Botanic Gardens (ANBG), Australia | 81,265,290 | 598 | MT473744 |
Prostantheroideae | Chloantheae | Dasymalla teckiana (F. Muell.) B.J. Conn & Henwood | Australian National Botanic Gardens (ANBG), Australia | 41,308,508 | 519 | MT473754 |
Prostantheroideae | Chloantheae | Dicrastylis parvifolia F. Muell. | Australian National Botanic Gardens (ANBG), Australia | 81,081,410 | 577 | MT473755 |
Symphorematoideae | – | Congea tomentosa Roxb. | Mengla, Yunnan, China | 40,494,132 | 110 | MT473752 |
Symphorematoideae | – | Sphenodesme mollis Craib | Mengla, Yunnan, China | 81,008,454 | 529 | MT473780 |
Tectonoideae | – | Tectona grandis L. f. | Mengla, Yunnan, China | 40,169,710 | 514 | MT473781 |
Viticoideae | – | Vitex glabrata R. Br. | Mengla, Yunnan, China | 70,126,282 | 722 | MT473782 |
Viticoideae | – | Vitex negundo var. cannabifolia (Siebold & Zucc.) Hand.-Mazz. | Kunming, Yunnan, China | 67,083,468 | 1387 | MT473783 |
Viticoideae | – | Vitex quinata (Lour.) F.N. Williams | Mengla, Yunnan, China | 69,282,366 | 828 | MT473784 |
Viticoideae | – | Vitex tripinnata (Lour.) Merr. | Guangzhou, Guangdong, China | 67,065,514 | 1404 | MT473785 |
Viticoideae | – | Vitex yunnanensis W.W. Sm. | Luquan, Yunnan, China | 70,217,642 | 395 | MT473786 |