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Fig. 4 | BMC Biology

Fig. 4

From: A 19-isolate reference-quality global pangenome for the fungal wheat pathogen Zymoseptoria tritici

Fig. 4

Expression polymorphism across the pangenome. a Proportion of genes showing expression > 10 counts per million (CPM) across genes categories. The frequencies are shown for orthogroups encoding putative effectors, secondary metabolite cluster genes (gene cluster), carbohydrate-active enzymes (CAZymes), secreted proteins. The frequencies are also shown for singleton, accessory and core orthogroup categories in the pangenome. b Proportion of orthogroups for which the expression coefficient of variation is > 50% [cov = sd (CPM)/mean (CPM)] among different gene and pangenome categories as in a. c Correlation of gene expression and the number of paralogs detected for the same gene per genome. The grey line shows the logarithmic regression based on the linear model log10 (CPM + 1) ~ log10 (number of paralogs). d Number of orthogroups with ≥ 10 paralogs per genome. Isolates are coloured by continent of origin

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