TY - JOUR AU - Smith, D. AU - Starborg, T. PY - 2018 DA - 2018// TI - Serial block face scanning electron microscopy in cell biology: applications and technology JO - Tissue Cell VL - 57 ID - Smith2018 ER - TY - JOUR AU - Shearer, T. AU - Bradley, R. S. AU - Hidalgo-Bastida, L. A. AU - Sherratt, M. J. AU - Cartmell, S. H. PY - 2016 DA - 2016// TI - Three-dimensional visualisation of soft biological structures by X-ray computed micro-tomography JO - J Cell Sci VL - 129 ID - Shearer2016 ER - TY - JOUR AU - Burnett, T. L. AU - Kelley, R. AU - Winiarski, B. AU - Contreras, L. AU - Daly, M. AU - Gholinia, A. PY - 2016 DA - 2016// TI - Large volume serial section tomography by Xe plasma FIB dual beam microscopy JO - Ultramicroscopy VL - 161 ID - Burnett2016 ER - TY - JOUR AU - McDermott, G. AU - Gros, M. A. AU - Knoechel, C. G. AU - Uchida, M. AU - Larabell, C. A. PY - 2009 DA - 2009// TI - Soft X-ray tomography and cryogenic light microscopy: the cool combination in cellular imaging JO - Trends Cell Biol VL - 19 ID - McDermott2009 ER - TY - JOUR AU - Truong, T. V. AU - Supatto, W. AU - Koos, D. S. AU - Choi, J. M. AU - Fraser, S. E. PY - 2011 DA - 2011// TI - Deep and fast live imaging with two-photon scanned light-sheet microscopy JO - Nat Methods VL - 8 ID - Truong2011 ER - TY - JOUR AU - Elliott, J. C. AU - Dover, S. D. PY - 1982 DA - 1982// TI - X-ray microtomography JO - J Microsc VL - 126 ID - Elliott1982 ER - TY - JOUR AU - Marxen, J. C. AU - Prymark, O. AU - Beckmann, F. AU - Neues, F. AU - Epple, M. PY - 2008 DA - 2008// TI - Embryonic shell formation in the snail Biomphalaria glabrata: a comparison between scanning electron microscopy (SEM) and synchrotron radiation micro computer tomography (SRμCT) JO - J Molluscan Stud VL - 74 ID - Marxen2008 ER - TY - JOUR AU - Bradley, R. S. AU - Withers, P. J. PY - 2016 DA - 2016// TI - Post-processing techniques for making reliable measurements from curve-skeletons JO - Comput Biol Med VL - 72 ID - Bradley2016 ER - TY - JOUR AU - Prakasam, M. AU - Chirazi, A. AU - Pyka, G. AU - Prokhodtseva, A. AU - Lichau, D. AU - Largeteau, A. PY - 2018 DA - 2018// TI - Fabrication and multiscale structural properties of interconnected porous biomaterial for tissue engineering by freeze isostatic pressure (FIP) JO - J Funct Biomater VL - 9 ID - Prakasam2018 ER - TY - JOUR AU - Topperwien, M. AU - Meer, F. AU - Stadelmann, C. AU - Salditt, T. PY - 2018 DA - 2018// TI - Three-dimensional virtual histology of human cerebellum by X-ray phase-contrast tomography JO - Proc Natl Acad Sci U S A VL - 115 ID - Topperwien2018 ER - TY - JOUR AU - Genant, H. K. AU - Block, J. E. AU - Steiger, P. AU - Glueer, C. C. AU - Smith, R. PY - 1987 DA - 1987// TI - Quantitative computed tomography in assessment of osteoporosis JO - Semin Nucl Med VL - 17 ID - Genant1987 ER - TY - JOUR AU - Maire, E. AU - Withers, P. J. PY - 2014 DA - 2014// TI - Quantitative X-ray tomography JO - Int Mater Rev VL - 59 ID - Maire2014 ER - TY - JOUR AU - Kyrieleis, A. AU - Titarenko, V. AU - Ibison, M. AU - Connolley, T. AU - Withers, P. J. PY - 2011 DA - 2011// TI - Region-of-interest tomography using filtered backprojection: assessing the practical limits JO - J Microsc VL - 241 ID - Kyrieleis2011 ER - TY - JOUR AU - O'Sullivan, J. D. B. AU - Behnsen, J. AU - Starborg, T. AU - MacDonald, A. S. AU - Phythian-Adams, A. T. AU - Else, K. J. PY - 2018 DA - 2018// TI - X-ray micro-computed tomography (μCT): an emerging opportunity in parasite imaging JO - Parasitology VL - 145 ID - O'Sullivan2018 ER - TY - JOUR AU - Withers, P. J. PY - 2007 DA - 2007// TI - X-ray nanotomography JO - Mater Today VL - 10 ID - Withers2007 ER - TY - JOUR AU - Krenkel, M. AU - Markus, A. AU - Bartels, M. AU - Dullin, C. AU - Alves, F. AU - Salditt, T. PY - 2015 DA - 2015// TI - Phase-contrast zoom tomography reveals precise locations of macrophages in mouse lungs JO - Sci Rep UK VL - 5 ID - Krenkel2015 ER - TY - JOUR AU - Pena Fernandez, M. AU - Cipiccia, S. AU - Dall'Ara, E. AU - Bodey, A. J. AU - Parwani, R. AU - Pani, M. PY - 2018 DA - 2018// TI - Effect of SR-microCT radiation on the mechanical integrity of trabecular bone using in situ mechanical testing and digital volume correlation JO - J Mech Behav Biomed Mater VL - 88 ID - Pena Fernandez2018 ER - TY - JOUR AU - Cartmell, S. AU - Huynh, K. AU - Lin, A. AU - Nagaraja, S. AU - Guldberg, R. PY - 2004 DA - 2004// TI - Quantitative microcomputed tomography analysis of mineralization within three-dimensional scaffolds in vitro JO - J Biomed Mater Res A VL - 69 ID - Cartmell2004 ER - TY - JOUR AU - Duke, E. AU - Dent, K. AU - Razi, M. AU - Collinson, L. M. PY - 2014 DA - 2014// TI - Biological applications of cryo-soft X-ray tomography JO - J Microsc Oxford VL - 255 ID - Duke2014 ER - TY - JOUR AU - Immel, A. AU - Cabec, A. AU - Bonazzi, M. AU - Herbig, A. AU - Temming, H. AU - Schuenemann, V. J. PY - 2016 DA - 2016// TI - Effect of X-ray irradiation on ancient DNA in sub-fossil bones - guidelines for safe X-ray imaging JO - Sci Rep VL - 6 ID - Immel2016 ER - TY - JOUR AU - Diaz, A. AU - Malkova, B. AU - Holler, M. AU - Guizar-Sicairos, M. AU - Lima, E. AU - Panneels, V. PY - 2015 DA - 2015// TI - Three-dimensional mass density mapping of cellular ultrastructure by ptychographic X-ray nanotomography JO - J Struct Biol VL - 192 ID - Diaz2015 ER - TY - JOUR AU - Bradley, R. S. AU - Robinson, I. K. AU - Yusuf, M. PY - 2017 DA - 2017// TI - 3D X-ray nanotomography of cells grown on electrospun scaffolds JO - Macromol Biosci VL - 17 UR - https://doi.org/10.1002/mabi.201600236 DO - 10.1002/mabi.201600236 ID - Bradley2017 ER - TY - JOUR AU - Bartels, M. AU - Krenkel, M. AU - Cloetens, P. AU - Mobius, W. AU - Salditt, T. PY - 2015 DA - 2015// TI - Myelinated mouse nerves studied by X-ray phase contrast zoom tomography JO - J Struct Biol VL - 192 ID - Bartels2015 ER - TY - JOUR AU - Meir, R. AU - Shamalov, K. AU - Betzer, O. AU - Motiei, M. AU - Horovitz-Fried, M. AU - Yehuda, R. PY - 2015 DA - 2015// TI - Nanomedicine for cancer immunotherapy: tracking cancer-specific T-cells in vivo with gold nanoparticles and CT imaging JO - ACS Nano VL - 9 ID - Meir2015 ER - TY - JOUR AU - Schulte, F. A. AU - Ruffoni, D. AU - Lambers, F. M. AU - Christen, D. AU - Webster, D. J. AU - Kuhn, G. PY - 2013 DA - 2013// TI - Local mechanical stimuli regulate bone formation and resorption in mice at the tissue level JO - PLoS One VL - 8 ID - Schulte2013 ER - TY - JOUR AU - Rawson, S. D. AU - Shearer, T. AU - Lowe, T. AU - O'Brien, M. AU - Wong, J. K. F. AU - Margetts, L. PY - 2018 DA - 2018// TI - Four-dimensional imaging of soft tissue and implanted biomaterial mechanics: a barbed suture case study for tendon repair JO - ACS Appl Mater Interfaces VL - 10 ID - Rawson2018 ER - TY - JOUR AU - Bech, M. AU - Tapfer, A. AU - Velroyen, A. AU - Yaroshenko, A. AU - Pauwels, B. AU - Hostens, J. PY - 2013 DA - 2013// TI - In-vivo dark-field and phase-contrast x-ray imaging JO - Sci Rep UK VL - 3 UR - https://doi.org/10.1038/srep03209 DO - 10.1038/srep03209 ID - Bech2013 ER - TY - JOUR AU - Gignac, P. M. AU - Kley, N. J. PY - 2014 DA - 2014// TI - Iodine-enhanced micro-CT imaging: methodological refinements for the study of the soft-tissue anatomy of post-embryonic vertebrates JO - J Exp Zool B Mol Dev Evol VL - 322 UR - https://doi.org/10.1002/jez.b.22561 DO - 10.1002/jez.b.22561 ID - Gignac2014 ER - TY - JOUR AU - Disney, C. M. AU - Eckersley, A. AU - McConnell, J. C. AU - Geng, H. AU - Bodey, A. J. AU - Hoyland, J. A. PY - 2019 DA - 2019// TI - Synchrotron tomography of intervertebral disc deformation quantified by digital volume correlation reveals microstructural influence on strain patterns JO - Acta Biomater VL - 92 ID - Disney2019 ER - TY - JOUR AU - Endrizzi, M. PY - 2018 DA - 2018// TI - X-ray phase-contrast imaging JO - Nuclear Inst Methods Physics Res A VL - 878 ID - Endrizzi2018 ER - TY - JOUR AU - Taiwo, O. O. AU - Finegan, D. P. AU - Gelb, J. AU - Holzner, C. AU - Brett, D. J. L. AU - Shearing, P. R. PY - 2016 DA - 2016// TI - The use of contrast enhancement techniques in X-ray imaging of lithium-ion battery electrodes JO - Chem Eng Sci VL - 154 ID - Taiwo2016 ER - TY - JOUR AU - Ismail, E. C. AU - Kaabar, W. AU - Garrity, D. AU - Gundogdu, O. AU - Bunk, O. AU - Pfeiffer, F. PY - 2010 DA - 2010// TI - X-ray phase contrast imaging of the bone-cartilage interface JO - Appl Radiat Isot VL - 68 ID - Ismail2010 ER - TY - JOUR AU - Schulz, G. AU - Gotz, C. AU - Muller-Gerbl, M. AU - Zanette, I. AU - Zdora, M. C. AU - Khimchenko, A. PY - 2017 DA - 2017// TI - Multimodal imaging of the human knee down to the cellular level JO - J Phys Conf Ser VL - 849 ID - Schulz2017 ER - TY - JOUR AU - Walton, L. A. AU - Bradley, R. S. AU - Withers, P. J. AU - Newton, V. L. AU - Watson, R. E. AU - Austin, C. PY - 2015 DA - 2015// TI - Morphological characterisation of unstained and intact tissue micro-architecture by X-ray computed micro- and nano-tomography JO - Sci Rep VL - 5 UR - https://doi.org/10.1038/srep10074 DO - 10.1038/srep10074 ID - Walton2015 ER - TY - JOUR AU - Karunakaran, C. AU - Lahlali, R. AU - Zhu, N. AU - Webb, A. M. AU - Schmidt, M. AU - Fransishyn, K. PY - 2015 DA - 2015// TI - Factors influencing real time internal structural visualization and dynamic process monitoring in plants using synchrotron-based phase contrast X-ray imaging JO - Sci Rep VL - 5 ID - Karunakaran2015 ER - TY - STD TI - McNeil A, Bradley RS, Withers PJ, Penney D. Imaging fossilised spiders in amber using lab-based phase contrast X-ray tomography. Proc SPIE. 2010. https://doi.org/10.1117/12.873024. ID - ref36 ER - TY - JOUR AU - Metscher, B. D. PY - 2009 DA - 2009// TI - MicroCT for comparative morphology: simple staining methods allow high-contrast 3D imaging of diverse non-mineralized animal tissues JO - BMC Physiol VL - 9 ID - Metscher2009 ER - TY - JOUR AU - Gignac, P. M. AU - Kley, N. J. AU - Clarke, J. A. AU - Colbert, M. W. AU - Morhardt, A. C. AU - Cerio, D. PY - 2016 DA - 2016// TI - Diffusible iodine-based contrast-enhanced computed tomography (diceCT): an emerging tool for rapid, high-resolution, 3-D imaging of metazoan soft tissues JO - J Anat VL - 228 ID - Gignac2016 ER - TY - JOUR AU - Staedler, Y. M. AU - Kreisberger, T. AU - Manafzadeh, S. AU - Chartier, M. AU - Handschuh, S. AU - Pamperl, S. PY - 2018 DA - 2018// TI - Novel computed tomography-based tools reliably quantify plant reproductive investment JO - J Exp Bot VL - 69 ID - Staedler2018 ER - TY - JOUR AU - Faulwetter, S. AU - Dailianis, T. AU - Vasileiadou, A. AU - Arvanitidis, C. PY - 2013 DA - 2013// TI - Contrast enhancing techniques for the application of micro-CT in marine biodiversity studies JO - Microsc Anal VL - 2 ID - Faulwetter2013 ER - TY - JOUR AU - Gamisch, A. AU - Staedler, Y. M. AU - Schonenberger, J. AU - Fischer, G. A. AU - Comes, H. P. PY - 2013 DA - 2013// TI - Histological and micro-CT evidence of stigmatic rostellum receptivity promoting auto-pollination in the madagascan orchid Bulbophyllum bicoloratum JO - PLoS One VL - 8 ID - Gamisch2013 ER - TY - JOUR AU - Scheller, E. L. AU - Troiano, N. AU - Vanhoutan, J. N. AU - Bouxsein, M. A. AU - Fretz, J. A. AU - Xi, Y. PY - 2014 DA - 2014// TI - Use of osmium tetroxide staining with microcomputerized tomography to visualize and quantify bone marrow adipose tissue in vivo JO - Methods Enzymol VL - 537 ID - Scheller2014 ER - TY - JOUR AU - Metscher, B. D. PY - 2009 DA - 2009// TI - MicroCT for developmental biology: a versatile tool for high-contrast 3D imaging at histological resolutions JO - Dev Dyn VL - 238 ID - Metscher2009 ER - TY - JOUR AU - Dunmore-Buyze, P. J. AU - Cruje, C. AU - Nong, Z. AU - Lee, J. J. AU - Kiernan, J. A. AU - Pickering, J. G. PY - 2019 DA - 2019// TI - 3D vessel-wall virtual histology of whole-body perfused mice using a novel heavy element stain JO - Sci Rep VL - 9 ID - Dunmore-Buyze2019 ER - TY - JOUR AU - Pauwels, E. AU - Loo, D. AU - Cornillie, P. AU - Brabant, L. AU - Hoorebeke, L. PY - 2013 DA - 2013// TI - An exploratory study of contrast agents for soft tissue visualization by means of high resolution X-ray computed tomography imaging JO - J Microsc VL - 250 ID - Pauwels2013 ER - TY - JOUR AU - Koç, M. ü. m. i. n. M. e. h. m. e. t. AU - Aslan, N. a. i. m. AU - Kao, A. l. e. x. a. n. d. e. r. P. AU - Barber, A. s. a. H. PY - 2019 DA - 2019// TI - Evaluation of X‐ray tomography contrast agents: A review of production, protocols, and biological applications JO - Microscopy Research and Technique VL - 82 ID - Koç2019 ER - TY - JOUR AU - Li, Z. AU - Ketcham, R. A. AU - Yan, F. AU - Maisano, J. A. AU - Clarke, J. A. PY - 2016 DA - 2016// TI - Comparison and evaluation of the effectiveness of two approaches of diffusible iodine-based contrast-enhanced computed tomography (diceCT) for avian cephalic material JO - J Exp Zool B Mol Dev Evol VL - 326 ID - Li2016 ER - TY - JOUR AU - Martins, E. S. J. AU - Utsch, J. AU - Kimm, M. A. AU - Allner, S. AU - Epple, M. F. AU - Achterhold, K. PY - 2017 DA - 2017// TI - Dual-energy micro-CT for quantifying the time-course and staining characteristics of ex-vivo animal organs treated with iodine- and gadolinium-based contrast agents JO - Sci Rep VL - 7 ID - Martins2017 ER - TY - JOUR AU - Li, Z. h. i. -. H. e. n. g. AU - Yan, F. e. i. AU - Ketcham, R. i. c. h. a. r. d. A. AU - Colbert, M. a. t. t. h. e. w. W. AU - Clarke, J. u. l. i. a. A. PY - 2019 DA - 2019// TI - Mass-transfer based modeling to investigate iodine staining effects for enhanced contrast X-ray computed tomography JO - Palaeoworld VL - 28 ID - Li2019 ER - TY - JOUR AU - Butters, T. D. AU - Castro, S. J. AU - Lowe, T. AU - Zhang, Y. AU - Lei, M. AU - Withers, P. J. PY - 2014 DA - 2014// TI - Optimal iodine staining of cardiac tissue for X-ray computed tomography JO - PLoS One VL - 9 ID - Butters2014 ER - TY - JOUR AU - Meyer, E. P. AU - Ulmann-Schuler, A. AU - Staufenbiel, M. AU - Krucker, T. PY - 2008 DA - 2008// TI - Altered morphology and 3D architecture of brain vasculature in a mouse model for Alzheimer's disease JO - Proc Natl Acad Sci U S A VL - 105 ID - Meyer2008 ER - TY - JOUR AU - Vickerton, P. AU - Jarvis, J. AU - Jeffery, N. PY - 2013 DA - 2013// TI - Concentration-dependent specimen shrinkage in iodine-enhanced microCT JO - J Anat VL - 223 ID - Vickerton2013 ER - TY - JOUR AU - Lee, J. T. AU - Chow, K. L. PY - 2012 DA - 2012// TI - SEM sample preparation for cells on 3D scaffolds by freeze-drying and HMDS JO - Scanning. VL - 34 ID - Lee2012 ER - TY - JOUR AU - Wehrl, H. F. AU - Bezrukov, I. AU - Wiehr, S. AU - Lehnhoff, M. AU - Fuchs, K. AU - Mannheim, J. G. PY - 2015 DA - 2015// TI - Assessment of murine brain tissue shrinkage caused by different histological fixatives using magnetic resonance and computed tomography imaging JO - Histol Histopathol VL - 30 ID - Wehrl2015 ER - TY - JOUR AU - Verleden, S. E. AU - Vasilescu, D. M. AU - Willems, S. AU - Ruttens, D. AU - Vos, R. AU - Vandermeulen, E. PY - 2014 DA - 2014// TI - The site and nature of airway obstruction after lung transplantation JO - Am J Respir Crit Care Med VL - 189 ID - Verleden2014 ER - TY - JOUR AU - Starborg, T. AU - O'Sullivan, J. D. B. AU - Carneiro, C. M. AU - Behnsen, J. AU - Else, K. J. AU - Grencis, R. K. PY - 2019 DA - 2019// TI - Experimental steering of electron microscopy studies using prior X-ray computed tomography JO - Ultramicroscopy. VL - 201 ID - Starborg2019 ER - TY - JOUR AU - Vasilescu, D. M. AU - Phillion, A. B. AU - Tanabe, N. AU - Kinose, D. AU - Paige, D. F. AU - Kantrowitz, J. J. PY - 2017 DA - 2017// TI - Nondestructive cryomicro-CT imaging enables structural and molecular analysis of human lung tissue JO - J Appl Physiol (1985) VL - 122 ID - Vasilescu2017 ER - TY - JOUR AU - Disney, C. M. AU - Madi, K. AU - Bodey, A. J. AU - Lee, P. D. AU - Hoyland, J. A. AU - Sherratt, M. J. PY - 2017 DA - 2017// TI - Visualising the 3D microstructure of stained and native intervertebral discs using X-ray microtomography JO - Sci Rep VL - 7 ID - Disney2017 ER - TY - JOUR AU - Astolfo, A. AU - Qie, F. AU - Kibleur, A. AU - Hao, X. AU - Menk, R. H. AU - Arfelli, F. PY - 2014 DA - 2014// TI - A simple way to track single gold-loaded alginate microcapsules using x-ray CT in small animal longitudinal studies JO - Nanomedicine VL - 10 ID - Astolfo2014 ER - TY - JOUR AU - Uchida, M. AU - Sun, Y. AU - McDermott, G. AU - Knoechel, C. AU - Gros, M. A. AU - Parkinson, D. PY - 2011 DA - 2011// TI - Quantitative analysis of yeast internal architecture using soft X-ray tomography JO - Yeast VL - 28 UR - https://doi.org/10.1002/yea.1834 DO - 10.1002/yea.1834 ID - Uchida2011 ER - TY - JOUR AU - Elgass, K. D. AU - Smith, E. A. AU - LeGros, M. A. AU - Larabell, C. A. AU - Ryan, M. T. PY - 2015 DA - 2015// TI - Analysis of ER-mitochondria contacts using correlative fluorescence microscopy and soft X-ray tomography of mammalian cells JO - J Cell Sci VL - 128 UR - https://doi.org/10.1242/jcs.169136 DO - 10.1242/jcs.169136 ID - Elgass2015 ER - TY - JOUR AU - Handschuh, S. AU - Beisser, C. J. AU - Ruthensteiner, B. AU - Metscher, B. D. PY - 2017 DA - 2017// TI - Microscopic dual-energy CT (microDECT): a flexible tool for multichannel ex vivo 3D imaging of biological specimens JO - J Microsc VL - 267 UR - https://doi.org/10.1111/jmi.12543 DO - 10.1111/jmi.12543 ID - Handschuh2017 ER - TY - JOUR AU - Murphy, C. J. AU - Gole, A. M. AU - Stone, J. W. AU - Sisco, P. N. AU - Alkilany, A. M. AU - Goldsmith, E. C. PY - 2008 DA - 2008// TI - Gold nanoparticles in biology: beyond toxicity to cellular imaging JO - Acc Chem Res VL - 41 ID - Murphy2008 ER - TY - JOUR AU - Fan, J. AU - Li, W. AU - Hung, W. AU - Chen, C. AU - Yeh, J. PY - 2011 DA - 2011// TI - Cytotoxicity and differentiation effects of gold nanoparticles to human bone marrow mesenchymal stem cells JO - Biomed Eng Appl Basis Commun VL - 23 ID - Fan2011 ER - TY - JOUR AU - Betzer, O. AU - Meir, R. AU - Dreifuss, T. AU - Shamalov, K. AU - Motiei, M. AU - Shwartz, A. PY - 2015 DA - 2015// TI - In-vitro optimization of nanoparticle-cell labeling protocols for in-vivo cell tracking applications JO - Sci Rep VL - 5 ID - Betzer2015 ER - TY - JOUR AU - Mok, P. L. AU - Leow, S. N. AU - Koh, A. E. AU - Mohd Nizam, H. H. AU - Ding, S. L. AU - Luu, C. PY - 2017 DA - 2017// TI - Micro-computed tomography detection of gold nanoparticle-labelled mesenchymal stem cells in the rat subretinal layer JO - Int J Mol Sci VL - 18 ID - Mok2017 ER - TY - JOUR AU - Chhour, P. AU - Naha, P. C. AU - O'Neill, S. M. AU - Litt, H. I. AU - Reilly, M. P. AU - Ferrari, V. A. PY - 2016 DA - 2016// TI - Labeling monocytes with gold nanoparticles to track their recruitment in atherosclerosis with computed tomography JO - Biomaterials VL - 87 ID - Chhour2016 ER - TY - JOUR AU - Oliveira-Filho, E. C. AU - Filho, J. S. AU - Novais, L. A. AU - Peternele, W. S. AU - Azevedo, R. B. AU - Grisolia, C. K. PY - 2016 DA - 2016// TI - Effects of gamma-Fe2O3 nanoparticles on the survival and reproduction of Biomphalaria glabrata (say, 1818) and their elimination from this benthic aquatic snail JO - Environ Sci Pollut Res Int VL - 23 ID - Oliveira-Filho2016 ER - TY - JOUR AU - Yamamoto, Y. AU - Shinohara, K. PY - 2002 DA - 2002// TI - Application of X-ray microscopy in analysis of living hydrated cells JO - Anat Rec VL - 269 ID - Yamamoto2002 ER - TY - JOUR AU - Carlson, D. B. AU - Gelb, J. AU - Palshin, V. AU - Evans, J. E. PY - 2013 DA - 2013// TI - Laboratory-based cryogenic soft X-ray tomography with correlative cryo-light and electron microscopy JO - Microsc Microanal VL - 19 ID - Carlson2013 ER - TY - JOUR AU - Johnson, T. R. C. PY - 2012 DA - 2012// TI - Dual-energy CT: general principles JO - Am J Roentgenol VL - 199 ID - Johnson2012 ER - TY - JOUR AU - Panta, R. K. AU - Bell, S. T. AU - Healy, J. L. AU - Aamir, R. AU - Bateman, C. J. AU - Moghiseh, M. PY - 2018 DA - 2018// TI - Element-specific spectral imaging of multiple contrast agents: a phantom study JO - J Instrum VL - 13 ID - Panta2018 ER - TY - JOUR AU - Egan, C. K. AU - Jacques, S. D. AU - Wilson, M. D. AU - Veale, M. C. AU - Seller, P. AU - Beale, A. M. PY - 2015 DA - 2015// TI - 3D chemical imaging in the laboratory by hyperspectral X-ray computed tomography JO - Sci Rep VL - 5 ID - Egan2015 ER - TY - STD TI - Stampanoni M, Mokso R, Marone F, Vila-Comamala J, Gorelick S, Trtik P, et al. Phase-contrast tomography at the nanoscale using hard x rays. Phys Rev B. 2010;81(14). https://doi.org/10.1103/PhysRevB.81.140105. ID - ref74 ER - TY - JOUR AU - Harkiolaki, M. AU - Darrow, M. C. AU - Spink, M. C. AU - Kosior, E. AU - Dent, K. AU - Duke, E. PY - 2018 DA - 2018// TI - Cryo-soft X-ray tomography: using soft X-rays to explore the ultrastructure of whole cells JO - Emerging Topics Life Sci VL - 2 ID - Harkiolaki2018 ER - TY - JOUR AU - Langer, M. AU - Pacureanu, A. AU - Suhonen, H. AU - Grimal, Q. AU - Cloetens, P. AU - Peyrin, F. PY - 2012 DA - 2012// TI - X-ray phase nanotomography resolves the 3D human bone ultrastructure JO - PLoS One VL - 7 ID - Langer2012 ER - TY - JOUR AU - Lenthe, G. H. AU - Hagenmuller, H. AU - Bohner, M. AU - Hollister, S. J. AU - Meinel, L. AU - Muller, R. PY - 2007 DA - 2007// TI - Nondestructive micro-computed tomography for biological imaging and quantification of scaffold-bone interaction in vivo JO - Biomaterials VL - 28 ID - Lenthe2007 ER - TY - JOUR AU - Dorsey, S. M. AU - Lin-Gibson, S. AU - Simon, C. G. PY - 2009 DA - 2009// TI - X-ray microcomputed tomography for the measurement of cell adhesionand proliferation in polymer scaffolds JO - Biomaterials VL - 30 ID - Dorsey2009 ER - TY - JOUR AU - Stradiotti, P. AU - Curti, A. AU - Castellazzi, G. AU - Zerbi, A. PY - 2009 DA - 2009// TI - Metal-related artifacts in instrumented spine. Techniques for reducing artifacts in CT and MRI: state of the art JO - Eur Spine J VL - 18 ID - Stradiotti2009 ER - TY - JOUR AU - Shu, X. AU - Lev-Ram, V. AU - Deerinck, T. J. AU - Qi, Y. AU - Ramko, E. B. AU - Davidson, M. W. PY - 2011 DA - 2011// TI - A genetically encoded tag for correlated light and electron microscopy of intact cells, tissues, and organisms JO - PLoS Biol VL - 9 ID - Shu2011 ER - TY - JOUR AU - Bradley, R. S. AU - Withers, P. J. PY - 2016 DA - 2016// TI - Correlative multiscale tomography of biological materials JO - Adv Tomogr Tech Mater Appl VL - 41 ID - Bradley2016 ER - TY - JOUR AU - Nunez, J. A. AU - Goring, A. AU - Hesse, E. AU - Thurner, P. J. AU - Schneider, P. AU - Clarkin, C. E. PY - 2017 DA - 2017// TI - Simultaneous visualisation of calcified bone microstructure and intracortical vasculature using synchrotron X-ray phase contrast-enhanced tomography JO - Sci Rep VL - 7 ID - Nunez2017 ER - TY - JOUR AU - Zehbe, R. AU - Riesemeier, H. AU - Kirkpatrick, C. J. AU - Brochhausen, C. PY - 2012 DA - 2012// TI - Imaging of articular cartilage-data matching using X-ray tomography, SEM, FIB slicing and conventional histology JO - Micron VL - 43 ID - Zehbe2012 ER - TY - JOUR AU - Brunelli, M. AU - Perrault, C. M. AU - Lacroix, D. PY - 2017 DA - 2017// TI - Short bursts of cyclic mechanical compression modulate tissue formation in a 3D hybrid scaffold JO - J Mech Behav Biomed Mater VL - 71 ID - Brunelli2017 ER - TY - JOUR AU - Schneider, G. AU - Guttmann, P. AU - Rehbein, S. AU - Werner, S. AU - Follath, R. PY - 2012 DA - 2012// TI - Cryo X-ray microscope with flat sample geometry for correlative fluorescence and nanoscale tomographic imaging JO - J Struct Biol VL - 177 ID - Schneider2012 ER - TY - STD TI - Kalson NS, Lu Y, Taylor SH, Starborg T, Holmes DF, Kadler KE. A structure-based extracellular matrix expansion mechanism of fibrous tissue growth. Elife. 2015;4. https://doi.org/10.7554/eLife.05958. ID - ref86 ER - TY - JOUR AU - Epah, J. AU - Palfi, K. AU - Dienst, F. L. AU - Malacarne, P. F. AU - Bremer, R. AU - Salamon, M. PY - 2018 DA - 2018// TI - 3D imaging and quantitative analysis of vascular networks: a comparison of ultramicroscopy and micro-computed tomography JO - Theranostics VL - 8 ID - Epah2018 ER - TY - JOUR AU - Power, R. M. AU - Huisken, J. PY - 2017 DA - 2017// TI - A guide to light-sheet fluorescence microscopy for multiscale imaging JO - Nat Methods VL - 14 ID - Power2017 ER - TY - JOUR AU - Bassi, A. AU - Schmid, B. AU - Huisken, J. PY - 2015 DA - 2015// TI - Optical tomography complements light sheet microscopy for in toto imaging of zebrafish development JO - Development VL - 142 UR - https://doi.org/10.1242/dev.116970 DO - 10.1242/dev.116970 ID - Bassi2015 ER - TY - JOUR AU - Buytaert, J. A. AU - Johnson, S. B. AU - Dierick, M. AU - Salih, W. H. AU - Santi, P. A. PY - 2013 DA - 2013// TI - MicroCT versus sTSLIM 3D imaging of the mouse cochlea JO - J Histochem Cytochem VL - 61 UR - https://doi.org/10.1369/0022155413478613 DO - 10.1369/0022155413478613 ID - Buytaert2013 ER - TY - JOUR AU - Buytaert, J. AU - Goyens, J. AU - Greef, D. AU - Aerts, P. AU - Dirckx, J. PY - 2014 DA - 2014// TI - Volume shrinkage of bone, brain and muscle tissue in sample preparation for micro-CT and light sheet fluorescence microscopy (LSFM) JO - Microsc Microanal VL - 20 ID - Buytaert2014 ER - TY - STD TI - Zeiss. Lightsheet Z.1. https://www.zeiss.com/microscopy/int/light/lightsheet-z-1.html. Accessed 11 Dec 2018. UR - https://www.zeiss.com/microscopy/int/light/lightsheet-z-1.html ID - ref92 ER - TY - JOUR AU - Burnett, T. L. AU - Withers, P. J. PY - 2019 DA - 2019// TI - Completing the picture through correlative characterization JO - Nat Mater VL - 18 ID - Burnett2019 ER - TY - JOUR AU - Burnett, T. L. AU - Winiarski, B. AU - Kelley, R. AU - Zhong, X. L. AU - Boona, I. N. AU - McComb, D. W. PY - 2016 DA - 2016// TI - Xe+ plasma FIB: 3D microstructures from nanometers to hundreds of micrometers JO - Microsc Today VL - 24 ID - Burnett2016 ER - TY - JOUR AU - Jacob, D. E. AU - Ruthensteiner, B. AU - Trimby, P. AU - Henry, H. AU - Martha, S. O. AU - Leitner, J. PY - 2019 DA - 2019// TI - Architecture of Anoteropora latirostris (Bryozoa, Cheilostomata) and implications for their biomineralization JO - Sci Rep Uk VL - 9 ID - Jacob2019 ER - TY - JOUR AU - Murer, F. K. AU - Sanchez, S. AU - Alvarez-Murga, M. AU - Michiel, M. AU - Pfeiffer, F. AU - Bech, M. PY - 2018 DA - 2018// TI - 3D maps of mineral composition and hydroxyapatite orientation in fossil bone samples obtained by X-ray diffraction computed tomography JO - Sci Rep VL - 8 ID - Murer2018 ER - TY - JOUR AU - Mitchell, R. L. AU - Coleman, M. AU - Davies, P. AU - North, L. AU - Pope, E. C. AU - Pleydell-Pearce, C. PY - 2019 DA - 2019// TI - Macro-to-nanoscale investigation of wall-plate joints in the acorn barnacle Semibalanus balanoides: correlative imaging, biological form and function, and bioinspiration JO - J R Soc Interface VL - 16 ID - Mitchell2019 ER - TY - JOUR AU - Zeller-Plumhoff, B. AU - Helmholz, H. AU - Feyerabend, F. AU - Dose, T. AU - Wilde, F. AU - Hipp, A. PY - 2018 DA - 2018// TI - Quantitative characterization of degradation processes in situ by means of a bioreactor coupled flow chamber under physiological conditions using time-lapse SRμCT JO - Mater Corros VL - 69 ID - Zeller-Plumhoff2018 ER - TY - JOUR AU - Blaser, S. AU - Schluter, S. AU - Vetterlein, D. PY - 2018 DA - 2018// TI - How much is too much?-influence of X-ray dose on root growth of faba bean (Vicia faba) and barley (Hordeum vulgare) JO - PLoS One VL - 13 UR - https://doi.org/10.1371/journal.pone.0193669 DO - 10.1371/journal.pone.0193669 ID - Blaser2018 ER - TY - JOUR AU - Mustansar, Z. AU - McDonald, S. A. AU - Sellers, W. I. AU - Manning, P. L. AU - Lowe, T. AU - Withers, P. J. PY - 2017 DA - 2017// TI - A study of the progression of damage in an axially loaded Branta leucopsis femur using X-ray computed tomography and digital image correlation JO - PeerJ VL - 5 ID - Mustansar2017 ER - TY - JOUR AU - Olubamiji, A. D. AU - Zhu, N. AU - Chang, T. AU - Nwankwo, C. K. AU - Izadifar, Z. AU - Honaramooz, A. PY - 2017 DA - 2017// TI - Traditional invasive and synchrotron-based noninvasive assessments of three-dimensional-printed hybrid cartilage constructs in situ JO - Tissue Eng Part C Methods VL - 23 ID - Olubamiji2017 ER - TY - JOUR AU - Izadifar, Z. AU - Honaramooz, A. AU - Wiebe, S. AU - Belev, G. AU - Chen, X. AU - Chapman, D. PY - 2016 DA - 2016// TI - Data of low-dose phase-based X-ray imaging for in situ soft tissue engineering assessments JO - Data Brief VL - 6 ID - Izadifar2016 ER - TY - JOUR AU - Helliwell, J. R. AU - Sturrock, C. J. AU - Mairhofer, S. AU - Craigon, J. AU - Ashton, R. W. AU - Miller, A. J. PY - 2017 DA - 2017// TI - The emergent rhizosphere: imaging the development of the porous architecture at the root-soil interface JO - Sci Rep UK VL - 7 ID - Helliwell2017 ER - TY - JOUR AU - Zappala, S. AU - Helliwell, J. R. AU - Tracy, S. R. AU - Mairhofer, S. AU - Sturrock, C. J. AU - Pridmore, T. PY - 2013 DA - 2013// TI - Effects of X-ray dose on rhizosphere studies using X-ray computed tomography JO - PLoS One VL - 8 ID - Zappala2013 ER - TY - JOUR AU - Hoffmann, R. AU - Schultz, J. A. AU - Schellhorn, R. AU - Rybacki, E. AU - Keupp, H. AU - Lemanis, R. PY - 2014 DA - 2014// TI - Non-invasive imaging methods applied to neo-and paleo-ontological cephalopod research JO - Biogeosciences VL - 11 ID - Hoffmann2014 ER - TY - JOUR AU - Xie, Q. AU - Faust, K. AU - Ommeren, R. AU - Sheikh, A. AU - Djuric, U. AU - Diamandis, P. PY - 2019 DA - 2019// TI - Deep learning for image analysis: personalizing medicine closer to the point of care JO - Crit Rev Clin Lab Sci VL - 56 ID - Xie2019 ER - TY - JOUR AU - Qinyang, L. AU - Andrew, M. AU - Thompson, M. AU - Blunt, M. J. AU - Bijeljic, B. PY - 2018 DA - 2018// TI - Optimization of image quality and acquisition time for lab-based X-ray microtomography using an iterative reconstruction algorithm JO - Adv Water Resour VL - 115 ID - Qinyang2018 ER - TY - BOOK AU - Harkiolaki, M. PY - 2018 DA - 2018// TI - Correlative soft-X Ray cryo-tomography and super resolution fluorescence microscopy imaging for the life sciences at diamond light source beamline B24. Conference proceedings, ToScA PB - University of Warwick CY - UK ID - Harkiolaki2018 ER - TY - JOUR AU - Anwar, S. M. AU - Majid, M. AU - Qayyum, A. AU - Awais, M. AU - Alnowami, M. AU - Khan, M. K. PY - 2018 DA - 2018// TI - Medical image analysis using convolutional neural networks: a review JO - J Med Syst VL - 42 ID - Anwar2018 ER -