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Table 2 Inversion calls

From: Linked-read sequencing identifies abundant microinversions and introgression in the arboviral vector Aedes aegypti

Inversion

Position

Size

Micro

Prog

Validation

1paa

1:3662097-3696373

34276

*

Long Ranger

Assembly

1pab

1:12833450-12864379

30929

*

Long Ranger

Long-read align

1pa

1:28526219-110482104

81955885

 

GROC-SVs

Long-read align

1cb

1:86573078-207047458

120474380

 

Long Ranger

Long-read align

1pac

1:110426504-110463452

36948

*

Long Ranger

Assembly

1qad

1:151766620-151847533

80913

*

Both

Long-read align

1qae

1:258805045-258838552

33507

*

GROC-SVs

Long-read align

1qaf

1:261838607-261877216

38609

*

Long Ranger

Assembly

1qag

1:273812946-273859121

46175

*

GROC-SVs

Long-read align

1qah

1:288864540-288902671

38131

*

Long Ranger

Both

2pc

2:36263327-68515898

32252571

 

Both

Long-read align

2pai

2:125768796-125807158

38362

*

Long Ranger

Long-read align

2pd

2:178843909-215734436

36890527

 

GROC-SVs

Long-read align

2qe

2:242868946-392168275

149299329

 

GROC-SVs

Long-read align

2qaj

2:276157193-276249519

92326

*

Long Ranger

Long-read align

2qak

2:312677653-312836936

159283

*

Both

Long-read align

2qal

2:387870950-387930807

59857

*

Long Ranger

Long-read align

2qam

2:456306790-456341898

35108

*

Long Ranger

Both

3pf

3:30056138-138778486

108722348

 

GROC-SVs

Long-read align

3pan

3:43852147-43896847

44700

*

Long Ranger

Long-read align

3pao

3:61571542-61611075

39533

*

Long Ranger

Long-read align

3pap

3:72073163-72216512

143349

*

Long Ranger

Long-read align

3paq

3:83753676-83794150

40474

*

Long Ranger

Long-read align

3cg

3:119518403-392983952

273465549

 

Both

Long-read align

3ph

3:161230873-171356784

10125911

 

Both

Long-read align

3qi

3:196536178-280271694

83735516

 

GROC-SVs

Long-read align

3qar

3:198751700-198836215

84515

*

Long Ranger

Long-read align

3qas

3:213245322-213670971

425649

*

Long Ranger

Long-read align

3qat

3:229688967-229782178

93211

*

Long Ranger

Both

3qau

3:257058020-257252866

194846

*

Both

Both

3qav

3:374671141-374714093

42952

*

Long Ranger

Assembly

3qaw

3:386773996-386844766

70770

*

Long Ranger

Long-read align