| S. microadriaticum CassKB8 | S. microadriaticum 04-503SCI.03 | S. tridacnidorum CCMP2592* | S. linucheae CCMP2456 | S. necroappetens CCMP2469 | S. natans CCMP2548* | S. pilosum CCMP2461 |
---|---|---|---|---|---|---|---|
ITS2 subtype | A1 | A1 | A3 | A4 | A13 | – | A2 |
Lifestyle | Symbiotic | Symbiotic | Symbiotic | Symbiotic | Opportunistic | Free-living | Free-living |
Host or source of origin | Cassiopea sp. (jellyfish) | Orbicella faveolata (stony coral) | Heliofungia actiniformis (stony coral) | Plexaura homamalla (octocoral) | Condylactis gigantea (anemone) | Open ocean | Zoanthus sociatus (zoanthid) |
Collection site | Hawaii (Pacific) | Florida (Atlantic) | Coral Sea (Pacific) | Bermuda (Atlantic) | Jamaica (Caribbean) | Hawaii (Pacific) | Jamaica (Caribbean) |
Overall G+C (%) | 51.91 | 50.46 | 51.01 | 50.36 | 50.85 | 51.79 | 48.21 |
Number of scaffolds | 67,937 | 57,558 | 6245 | 37,772 | 104,583 | 2855 | 48,302 |
Assembly length (bp) | 813,744,491 | 775,008,844 | 1,103,301,044 | 694,902,460 | 767,953,253 | 761,619,964 | 1,089,424,773 |
N50 scaffold length (bp) | 42,989 | 49,975 | 651,264 | 58,075 | 14,528 | 610,496 | 62,444 |
Max. scaffold length (Mbp) | 0.38 | 1.08 | 4.01 | 0.46 | 1.34 | 3.40 | 1.34 |
Number of contigs | 167,159 | 162,765 | 7913 | 141,380 | 157,685 | 4262 | 142,969 |
N50 contig length (bp) | 10,400 | 11,136 | 356,695 | 11,147 | 11,420 | 358,021 | 17,506 |
Max. contig length (Mbp) | 0.15 | 1.05 | 2.96 | 0.19 | 1.34 | 2.90 | 1.34 |
Gap (%) | 1.15 | 1.44 | 0.02 | 1.35 | 0.56 | 0.02 | 0.79 |
Estimated genome size (bp) | 1,120,150,369 | 1,052,668,212 | 1,287,259,774 | 914,781,885 | 1,007,022,374 | 740,100,732 | 1,993,912,458 |
Assembled fraction of genome (%) | 72.65 | 73.62 | 85.71 | 75.96 | 76.26 | 100.03 | 54.64 |