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Table 1 The statistics of the M. ruthenica genome

From: The genome of a wild Medicago species provides insights into the tolerant mechanisms of legume forage to environmental stress

Genome assembly

 

N50

N90

Total length

Contigs

612.99 Kb

247.80 Kb

902.93 Mb

Scaffolds

99.39 Mb

90.05 Mb

904.13 Mb

Genome annotation

Repetitive sequences

Categories

Length (bp)

Percentage (%)

DNA transposon

24,361,896

2.6841

LTR

470,694,297

51.859

LINE

15,815,260

1.7425

SINE

81,673

0.0090

Other

6,173,813

0.6753

Protein-coding genes

Number

Annotated number

Average CDS length

50,162

49,176

1050 bp

Non-coding RNAs

Categories

Number

Percentage (%)

miRNA

3820

0.0538

tRNA

788

0.0065

rRNA

364

0.0050

snRNA

2892

0.0355

  1. LTR long terminal repeat, LINE long interspersed nuclear elements, SINE short interspersed nuclear elements, CDS coding sequence