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Table 1 Assembly statistics for N. fowleri strains V212, 986, and ATCC 30863

From: Genomics and transcriptomics yields a system-level view of the biology of the pathogen Naegleria fowleri

 

N. fowleri V212

N. fowleri 986

N. fowleri 30863

Number of scaffolds

1859

990

1124

Total size of scaffolds

27,711,821

27,495,188

29,619,856

Longest scaffold

387,133

390,775

471,424

Mean scaffold size

14,907

2354

26,352

N50

92,316

101,682

136,406

L50

86

83

63

Number of contigs

1962

1919

2530

Total size of contigs

27,703,916

27,397,881

28,636,847

Longest contig

372,317

272,583

236,403

Mean contig size

14,120

14,277

11,319

N50

86,051

45,674

38,800

L50

93

182

213

BUSCO complete

88.3%

87.9%

87.8%

BUSCO single copy

76.9%

76.5%

73.7%

BUSCO duplicate

11.4%

11.4%

14.1%

BUSCO fragmented

2.4%

3.1%

2.7%

BUSCO missing

9.3%

9.0%

9.5%