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Table 1 Assembly statistics for N. fowleri strains V212, 986, and ATCC 30863

From: Genomics and transcriptomics yields a system-level view of the biology of the pathogen Naegleria fowleri

  N. fowleri V212 N. fowleri 986 N. fowleri 30863
Number of scaffolds 1859 990 1124
Total size of scaffolds 27,711,821 27,495,188 29,619,856
Longest scaffold 387,133 390,775 471,424
Mean scaffold size 14,907 2354 26,352
N50 92,316 101,682 136,406
L50 86 83 63
Number of contigs 1962 1919 2530
Total size of contigs 27,703,916 27,397,881 28,636,847
Longest contig 372,317 272,583 236,403
Mean contig size 14,120 14,277 11,319
N50 86,051 45,674 38,800
L50 93 182 213
BUSCO complete 88.3% 87.9% 87.8%
BUSCO single copy 76.9% 76.5% 73.7%
BUSCO duplicate 11.4% 11.4% 14.1%
BUSCO fragmented 2.4% 3.1% 2.7%
BUSCO missing 9.3% 9.0% 9.5%